ggKbase home page

A1-18-all-fractions_k255_1954766

Search features with annotation key words

Displaying items 31-60 of 152 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_1954766_31
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(29333..30265)
DNA (933bp) protein (311aa)
surE; stationary phase survival protein SurE (EC:3.1.3.5)
5'-nucleotidase SurE id=3793191 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_1954766_32
unknown

Not on your lists

30310..31053
DNA (744bp) protein (248aa)

This feature has no annotations

A1-18-all-fractions_k255_1954766_33
R_RIF_OP11_03_48_12, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(31072..32637)
DNA (1566bp) protein (522aa)
Putative uncharacterized protein n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PT67_9BACT
Tax=RIFCSPHIGHO2_01_FULL_RIF_OP11_03_48_12_curated
A1-18-all-fractions_k255_1954766_34
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(32630..33853)
DNA (1224bp) protein (408aa)
Putative membrane protein id=2885537 bin=GWA1_Deltaproteobacteria_52_35 species=Geitlerinema sp. PCC 7407 genus=Geitlerinema taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hypothetical protein
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_1954766_35
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(33886..34641)
DNA (756bp) protein (252aa)
UPF0309 protein ABC0887 id=3793192 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bacillus clausii genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_1954766_36
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(34657..37125)
DNA (2469bp) protein (823aa)
Organic solvent tolerance protein id=3287364 bin=GWA1_Deltaproteobacteria_52_35 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
organic solvent tolerance protein
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_1954766_37
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(37101..37979)
DNA (879bp) protein (293aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta id=3793194 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
acetyl-coenzyme A carboxylase carboxyl transferase subunit beta
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_1954766_38
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(38027..39295)
DNA (1269bp) protein (423aa)
Hamp domain/gaf domain/hd domain protein id=3287372 bin=GWA1_Deltaproteobacteria_52_35 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hamp domain/gaf domain/hd domain-containing protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_1954766_39
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(39484..40431)
DNA (948bp) protein (316aa)
Ribosomal RNA small subunit methyltransferase I id=3287375 bin=GWA1_Deltaproteobacteria_52_35 species=Marinobacter nanhaiticus genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_1954766_40
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

40475..40831
DNA (357bp) protein (119aa)
id=3793197 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_1954766_41
unknown

Not on your lists

comp(40847..41536)
DNA (690bp) protein (230aa)

This feature has no annotations

A1-18-all-fractions_k255_1954766_42
R_Bdellovibrionales_40_15, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(41517..43124)
DNA (1608bp) protein (536aa)
Polysaccharide deacetylase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Y74_SOLUE
polysaccharide deacetylase
Tax=RIFCSPHIGHO2_02_FULL_Bdellovibrionales_40_15_curated
A1-18-all-fractions_k255_1954766_43
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(43155..43640)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Bacteriovorax sp. Seq25_V RepID=T0RCU7_9DELT
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
A1-18-all-fractions_k255_1954766_44
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(43713..44192)
DNA (480bp) protein (160aa)
UPF0102 protein WQE_15186 id=3793198 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
UPF0102 protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_1954766_45
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(44394..45191)
DNA (798bp) protein (266aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII id=3287449 bin=GWA1_Deltaproteobacteria_52_35 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_1954766_46
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists


comp(45204..45665)
DNA (462bp) protein (154aa)
50S ribosomal protein L19 id=3793254 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
50S ribosomal protein L19
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_1954766_47
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(45744..46385)
DNA (642bp) protein (214aa)
Putative uncharacterized protein id=3793255 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_1954766_48
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(46428..47210)
DNA (783bp) protein (261aa)
tRNA (guanine-N(1)-)-methyltransferase id=3793267 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Roseburia inulinivorans genus=Roseburia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
tRNA (guanine-N1)-methyltransferase
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_1954766_49
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(47158..47442)
DNA (285bp) protein (95aa)
UPF0109 protein BMS_2147 id=3793269 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_1954766_50
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists


comp(47693..47938)
DNA (246bp) protein (82aa)
30S ribosomal protein S16 id=3793271 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Sutterella parvirubra genus=Sutterella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
small subunit ribosomal protein S16
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_1954766_51
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(48040..48432)
DNA (393bp) protein (131aa)
cheB; chemotaxis response regulator protein-glutamate methylesterase (EC:3.1.1.61)
Two component response regulator PhoB id=3793273 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Rheinheimera nanhaiensis genus=Rheinheimera taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_1954766_52
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48429..49568)
DNA (1140bp) protein (380aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
Ferrochelatase n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U9Z7_9DELT
ferrochelatase
A1-18-all-fractions_k255_1954766_53
Brassica napus, Brassica, Brassicales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(49647..50345)
DNA (699bp) protein (233aa)
Cell wall-plasma membrane linker protein n=1 Tax=Brassica napus RepID=Q39353_BRANA
Cell wall-plasma membrane linker protein {ECO:0000313|EMBL:CAA64425.1}; TaxID=3708 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.;" source="Brassica napus (Rape).;"
hypothetical protein
A1-18-all-fractions_k255_1954766_54
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(50393..50956)
DNA (564bp) protein (188aa)
Transcription elongation factor GreA id=3063303 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
transcription elongation factor GreB
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_1954766_55
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(50956..52278)
DNA (1323bp) protein (441aa)
ABC transporter related-protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIU4_9BACT
ABC transporter related-protein {ECO:0000313|EMBL:EEF60171.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
aliphatic sulfonates ABC transporter ATP-binding protein
A1-18-all-fractions_k255_1954766_56
R_WOR_2_67_20, WOR-2, Bacteria

Not on your lists

comp(52275..54077)
DNA (1803bp) protein (601aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NXY9_9BACT
ABC transporter permease
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_67_20_curated
A1-18-all-fractions_k255_1954766_57
unknown

Not on your lists

comp(54098..54517)
DNA (420bp) protein (140aa)

This feature has no annotations

A1-18-all-fractions_k255_1954766_58
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(54654..55796)
DNA (1143bp) protein (381aa)
HNH endonuclease id=2907783 bin=GWA1_Deltaproteobacteria_52_35 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
HNH endonuclease
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_1954766_59
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

56626..57390
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CBP6_9LEPT
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
A1-18-all-fractions_k255_1954766_60
R_Deltaproteobacteria_38_15, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57400..58386)
DNA (987bp) protein (329aa)
ADP-L-glycero-D-manno-heptose-6-epimerase id=3063297 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
ADP-L-glycero-D-manno-heptose-6-epimerase
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_38_15_curated
Displaying items 31-60 of 152 in total

View Taxonomy