ggKbase home page

A1-18-all-fractions_k255_2941922

Search features with annotation key words

Displaying items 61-78 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_2941922_61
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(63530..64927)
DNA (1398bp) protein (466aa)
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCQ3_9BACT
sigma-54 dependent DNA-binding response regulator
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_2941922_62
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(64936..66387)
DNA (1452bp) protein (484aa)
Signal transduction histidine kinase id=3182024 bin=GWA1_Deltaproteobacteria_52_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Signal transduction histidine kinase
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_2941922_63
unknown

Not on your lists

comp(66489..66911)
DNA (423bp) protein (141aa)

This feature has no annotations

A1-18-all-fractions_k255_2941922_64
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

67073..68308
DNA (1236bp) protein (412aa)
Truncated possibly inactive lysyl-tRNA synthetase id=3959296 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Magnetospirillum magneticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_2941922_65
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(68325..70178)
DNA (1854bp) protein (618aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
ABC transporter ATP-binding component id=3959295 bin=GWB1_Deltaproteobacteria_rel_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_2941922_66
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(70175..71917)
DNA (1743bp) protein (581aa)
ABC transporter ATP-binding component id=3959294 bin=GWB1_Deltaproteobacteria_rel_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
ABC transporter-like protein
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_2941922_67
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(72004..73044)
DNA (1041bp) protein (347aa)
Pseudouridine synthase, RluA family id=3959293 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Treponema saccharophilum genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
RluA family pseudouridine synthase
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_2941922_68
RIFOXYD1_FULL_Bdellovibrionales_44_7_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

73062..74240
DNA (1179bp) protein (393aa)
Putative type II/IV secretion system protein id=3182009 bin=GWA1_Deltaproteobacteria_52_35 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
putative type II/IV secretion system protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_44_7_curated
A1-18-all-fractions_k255_2941922_69
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(74253..75092)
DNA (840bp) protein (280aa)
3-keto-5-aminohexanoate cleavage enzyme id=3959290 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
3-keto-5-aminohexanoate cleavage protein
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_2941922_70
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(75128..75973)
DNA (846bp) protein (282aa)
id=3182006 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_2941922_71
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(75992..76789)
DNA (798bp) protein (266aa)
id=3959288 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_2941922_72
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(76804..77697)
DNA (894bp) protein (298aa)
Inner-membrane translocator id=3959287 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
rbsC; sugar ABC transporter permease
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_2941922_73
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(77694..78749)
DNA (1056bp) protein (352aa)
Inner-membrane translocator id=3181999 bin=GWA1_Deltaproteobacteria_52_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
ribose ABC transporter permease
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_2941922_74
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(78746..80341)
DNA (1596bp) protein (532aa)
ABC transporter related-protein id=3959285 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
ABC transporter
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_2941922_75
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(80347..81351)
DNA (1005bp) protein (335aa)
Basic membrane lipoprotein id=3959284 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
rbsB; ABC-type transport system substrate-binding protein
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_2941922_76
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

81387..82298
DNA (912bp) protein (304aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=3181991 bin=GWA1_Deltaproteobacteria_52_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
two component sigma54 specific Fis family transcriptional regulator
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
A1-18-all-fractions_k255_2941922_77
unknown

Not on your lists

comp(82152..83087)
DNA (936bp) protein (312aa)

This feature has no annotations

A1-18-all-fractions_k255_2941922_78
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(83112..84095)
DNA (984bp) protein (328aa)
id=3283217 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
Displaying items 61-78 of 78 in total

View Taxonomy