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A1-18-all-fractions_k255_3226096

Search features with annotation key words

Displaying items 211-240 of 276 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_3226096_211
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(221890..223719)
DNA (1830bp) protein (610aa)
Peptide chain release factor 3 id=3907889 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
prfC; peptide chain release factor 3
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_3226096_212
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

223787..224236
DNA (450bp) protein (150aa)
id=3907891 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_3226096_213
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

224314..224874
DNA (561bp) protein (187aa)
id=3537357 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hypothetical protein
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_3226096_214
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

225141..225689
DNA (549bp) protein (183aa)
id=3907892 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_3226096_215
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

225737..226954
DNA (1218bp) protein (406aa)
Ribonuclease D id=3907893 bin=GWB1_Deltaproteobacteria_rel_55_8 species=gamma proteobacterium HTCC5015 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
ribonuclease D
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_3226096_216
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

226990..228342
DNA (1353bp) protein (451aa)
Major facilitator superfamily MFS_1 id=2975946 bin=GWA1_Deltaproteobacteria_52_35 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
glp; glycerol 3-phosphate permease
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
A1-18-all-fractions_k255_3226096_217
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

228443..229333
DNA (891bp) protein (297aa)
id=3907895 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_3226096_218
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

229368..230882
DNA (1515bp) protein (505aa)
Similar to heat shock protease DegP/HtrA id=2975943 bin=GWA1_Deltaproteobacteria_52_35 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
periplasmic serine protease, Do/DeqQ family
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_3226096_219
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(230921..231421)
DNA (501bp) protein (167aa)
SEC-C domain protein id=2975940 bin=GWA1_Deltaproteobacteria_52_35 species=Pyramidobacter piscolens genus=Pyramidobacter taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
UPF0225 protein YchJ
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A1-18-all-fractions_k255_3226096_220
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

231485..231841
DNA (357bp) protein (119aa)
Protein CyaY id=2975936 bin=GWA1_Deltaproteobacteria_52_35 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
frataxin family protein
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_3226096_221
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

231855..232676
DNA (822bp) protein (274aa)
hypothetical protein LkmesMB_02550 id=2103157 bin=GWE2_RBX1_39_32 species=Leptospira kmetyi genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein
Tax=GWA2_WOR_2_47_8_curated
A1-18-all-fractions_k255_3226096_222
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

232673..233923
DNA (1251bp) protein (417aa)
Efflux ABC transporter, permease protein id=4400796 bin=GWF2_OP9-related_38_17 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
lolE; permease component of lipoprotein releasing system
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
A1-18-all-fractions_k255_3226096_223
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

233931..234593
DNA (663bp) protein (221aa)
ABC transporter, ATP-binding protein id=1968910 bin=GWD2_RBX1-related_39_127 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
ABC transporter related protein
Tax=GWA2_WOR_2_47_8_curated
A1-18-all-fractions_k255_3226096_224
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(234564..234983)
DNA (420bp) protein (140aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=uncultured bacterium RepID=K2BA29_9BACT
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RBG_16_Gammaproteobacteria_62_13__curated
A1-18-all-fractions_k255_3226096_225
unknown

Not on your lists

235112..236008
DNA (897bp) protein (299aa)

This feature has no annotations

A1-18-all-fractions_k255_3226096_226
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

236083..236337
DNA (255bp) protein (85aa)
Glutaredoxin 3 id=2975933 bin=GWA1_Deltaproteobacteria_52_35 species=Chamaesiphon minutus genus=Chamaesiphon taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
glutaredoxin GrxC
Tax=GWA1_Bdellovibrionales_52_35_curated
A1-18-all-fractions_k255_3226096_227
unknown

Not on your lists

236321..236692
DNA (372bp) protein (124aa)

This feature has no annotations

A1-18-all-fractions_k255_3226096_228
Bdellovibrio sp. ArHS, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(236641..237441)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Bdellovibrio exovorus JSS RepID=M4VSB8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KHD89661.1}; TaxID=1569284 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio sp. ArHS.;"
hypothetical protein
A1-18-all-fractions_k255_3226096_229
Actinobacillus pleuropneumoniae, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

237481..239127
DNA (1647bp) protein (549aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=754259 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.;" source="Actinobacillus pleuropneumoniae serovar 10 str. D13039.;"
NAD-dependent protein deacylase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P373_9BACT
NAD-dependent deacetylase
A1-18-all-fractions_k255_3226096_230
unknown

Not on your lists

239171..239452
DNA (282bp) protein (94aa)
hypothetical protein
A1-18-all-fractions_k255_3226096_231
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

239670..241727
DNA (2058bp) protein (686aa)
DNA topoisomerase III (EC:5.99.1.2)
DNA topoisomerase id=2871216 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB1_Bdellovibrionales_55_8_curated
A1-18-all-fractions_k255_3226096_232
unknown

Not on your lists

241775..242113
DNA (339bp) protein (113aa)

This feature has no annotations

A1-18-all-fractions_k255_3226096_233
unknown

Not on your lists

242233..242472
DNA (240bp) protein (80aa)

This feature has no annotations

A1-18-all-fractions_k255_3226096_234
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(242514..243521)
DNA (1008bp) protein (336aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355, ECO:0000313|EMBL:CAE79833.1};; TaxID=264462 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529; / HD100).;"
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=Q6MLM4_BDEBA
ribonucleoside-diphosphate reductase
A1-18-all-fractions_k255_3226096_235
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(243577..245922)
DNA (2346bp) protein (782aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=765869 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio bacteriovorus W.;"
Ribonucleoside-diphosphate reductase n=2 Tax=Stenotrophomonas maltophilia RepID=B4SSM9_STRM5
ribonucleoside-diphosphate reductase, alpha subunit
A1-18-all-fractions_k255_3226096_236

Not on your lists

246496..247587
DNA (1092bp) protein (364aa)
Peptidase C26 {ECO:0000313|EMBL:AIA11425.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
A1-18-all-fractions_k255_3226096_237
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

247669..247914
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39V13_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB31911.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
A1-18-all-fractions_k255_3226096_238
unknown

Not on your lists

248007..248564
DNA (558bp) protein (186aa)

This feature has no annotations

A1-18-all-fractions_k255_3226096_239
unknown

Not on your lists

248782..249111
DNA (330bp) protein (110aa)

This feature has no annotations

A1-18-all-fractions_k255_3226096_240
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(249188..249985)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium BDW918 RepID=I2JKF3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFB72523.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
hypothetical protein
Displaying items 211-240 of 276 in total

View Taxonomy