ggKbase home page

A1-18-all-fractions_k255_4318665_22

Organism: A1-18-all-fractions_metab_conc_18

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 21125..21634

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000255|HAMAP-Rule:MF_00163}; Short=PDF {ECO:0000255|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000255|HAMAP-Rule:MF_00163};; Polypeptide deformylase {ECO:0000255|HAMAP-Rule:MF_00163}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 169.0
  • Bit_score: 303
  • Evalue 1.30e-79
Peptide deformylase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=DEF_PHEZH similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 169.0
  • Bit_score: 303
  • Evalue 9.10e-80
polypeptide deformylase similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 169.0
  • Bit_score: 303
  • Evalue 2.60e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Phenylobacterium zucineum → Phenylobacterium → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGGCGATCCGCGAAATCCTCGTTGTCCCGAACCCGCTGCTGAAGCAGGTCTCCACGCCCGTGGATGTGGTGACCGACGAGCTGCGCGCCCTGATGGACGACATGCTGGAGACCATGTACGCCGCGCCCGGCATCGGCCTGGCCGCAATCCAGGTGGGCGTCGCCAAGCGCATTATCGTCATGGACCTCTCCCGCGACGACGAGGAGAAGCAGCCCCGCTATTACGTCAATCCGGAGATCCTCTGGGCCTCGGACGAAACCGCGCCCTACGAGGAAGGCTGTCTCTCGGTGCCGGAGATCTACGACGAGGTGGAGCGTCCCGCGAAGGTCAAGCTGCGCTACCTCAACTACCAGGGTGAGCCGGTCGAGGAGGACGCCGAGGGCCTGTTCGCCGTCTGCATCCAGCACGAGATGGACCACCTCGACGGTGTCCTCTTCATCGACCACCTGTCCCGCCTGAAGCGCGAACAGGCCATCAAGAAGGTCAAGAAACAGGCGAAGGCGGCTTAG
PROTEIN sequence
Length: 170
MAIREILVVPNPLLKQVSTPVDVVTDELRALMDDMLETMYAAPGIGLAAIQVGVAKRIIVMDLSRDDEEKQPRYYVNPEILWASDETAPYEEGCLSVPEIYDEVERPAKVKLRYLNYQGEPVEEDAEGLFAVCIQHEMDHLDGVLFIDHLSRLKREQAIKKVKKQAKAA*