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A1-18-all-fractions_k255_1823385_3

Organism: A1-18-all-fractions_metab_conc_18

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(1488..1778)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A1B6_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 90.0
  • Bit_score: 94
  • Evalue 6.20e-17
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 90.0
  • Bit_score: 94
  • Evalue 1.80e-17
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 91.0
  • Bit_score: 95
  • Evalue 3.00e-17

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Taxonomy

R_Phenylobacterium_70_10 → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
CTGATCGACCACTACCGCCGCCGCGGCGCGCGGCCCGAGGCGCCGATCGAGGCCGCCGAAGCCCTGTTCGCCCACGACGACCTGGAGGCGCGCACCGCGAGCCAGGACCTCGCCAAGCTGCTCGACACCCTGCCGGTCCGTCAGCGGACCCTGCTGCGCGACGTCAAGATCACCGGCCTTTCGATCCGCGAGGCCGCGGACCGGGCCGGCATGTCGGAGTCCGCCGGCAAGGTCTCCATCCACCGTGCCATGAAGGCCATGACGAGGAGGGCCAACCGTGTCGACGGATGA
PROTEIN sequence
Length: 97
LIDHYRRRGARPEAPIEAAEALFAHDDLEARTASQDLAKLLDTLPVRQRTLLRDVKITGLSIREAADRAGMSESAGKVSIHRAMKAMTRRANRVDG*