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A1-18-all-fractions_k255_1882321_3

Organism: A1-18-all-fractions_metab_conc_18

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(1855..2661)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DE82_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 267.0
  • Bit_score: 505
  • Evalue 3.30e-140
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 267.0
  • Bit_score: 505
  • Evalue 4.60e-140
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 268.0
  • Bit_score: 503
  • Evalue 2.10e-140

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Taxonomy

Hoeflea phototrophica → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
GACATCGCCCAGGCGACCGGCACCTCGCTTGGCGAGTTCCGGCGAATCGTCAACATGGTCCAGAAAGGCGAGCGCGAGGCACGCATCGCCAAGAAGGAAATGGTCGAGGCCAACCTCCGCCTCGTCATCTCCATCGCCAAGAAATACACCAACCGGGGCTTGCAGTTCCTCGACCTCATCCAGGAAGGCAACATCGGCCTGATGAAGGCGGTCGATAAGTTCGAATACCGCCGCGGCTACAAATTCTCGACCTACGCCACCTGGTGGATCCGGCAGGCGATCACCCGCTCGATCGCCGACCAGGCGCGCACCATCCGCATCCCGGTGCACATGATCGAGACGATCAACAAGATCGTCCGCACCTCGCGCCAGATGCTGCACGAGATCGGCCGCGAGCCGACCCCGGAGGAACTGGCCGAGAAGCTCGCCATGCCGCTCGAGAAGGTCCGCAAGGTCCTGAAGATCGCCAAGGAGCCGATCAGCCTCGAGACCCCGATCGGCGACGAGGAAGACAGCCACCTGGGCGACTTCATCGAGGACAAGAACGCGATCCTGCCGATCGACGCGGCCATCCAGTCGAACCTGCGCGAGACCACCACCCGCGTGCTGGCGTCCCTGACGCCGCGCGAGGAGCGCGTCCTGCGCATGCGCTTCGGCATCGGCATGAACACCGACCACACCCTCGAGGAGGTCGGCCAGCAGTTCTCCGTGACCCGCGAACGCATCCGTCAGATCGAGGCCAAGGCGCTGCGCAAGCTGAAGCACCCCTCGCGCTCGCGGAAACTGCGCAGCTTCCTCGACAGCTAG
PROTEIN sequence
Length: 269
DIAQATGTSLGEFRRIVNMVQKGEREARIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLKIAKEPISLETPIGDEEDSHLGDFIEDKNAILPIDAAIQSNLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDS*