ggKbase home page

A1-18-all-fractions_k255_3376346_3

Organism: A1-18-all-fractions_metab_conc_4

near complete RP 52 / 55 MC: 7 BSCG 51 / 51 MC: 9 ASCG 12 / 38
Location: comp(3115..3465)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RC0_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 103.0
  • Bit_score: 93
  • Evalue 9.80e-17
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 103.0
  • Bit_score: 93
  • Evalue 2.80e-17
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABJ87800.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 103.0
  • Bit_score: 93
  • Evalue 1.40e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Solibacter usitatus → Candidatus Solibacter → Solibacterales → Solibacteres → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGAACTACTTGAAAGCCCGCTCCTCGAGGCCCGCTCCGGTGGAAGACGAAGTGCTCGGGTCGGTCCCGGATTCCGCCGCGCTGAGCCCGTTCCAGATGCTCGAGCGCGCGCGATCCGGGCCCCTCGTGCAGAGCCTGCTCGATCGGGCGCTCGACGAAACCGAGAAGCGCGTCTTCACGCTCCATTACGGAGACGACATGCCGCTCGACGTGATCACGCGGTTGCTCGGCCTGCAGAACCGGAGCGGCGCCAAGGCGTTCATCGTCAGCGCCCGCCGGAAGATTTCACGGGTCATGCAGCAGTGGAACGCGCGAGAGCTGCGGTTGCTCTCGGAGGGAGGCGCGCGATGA
PROTEIN sequence
Length: 117
MNYLKARSSRPAPVEDEVLGSVPDSAALSPFQMLERARSGPLVQSLLDRALDETEKRVFTLHYGDDMPLDVITRLLGLQNRSGAKAFIVSARRKISRVMQQWNARELRLLSEGGAR*