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A1-18-all-fractions_k255_4061054_32

Organism: A1-18-all-fractions_metab_conc_4

near complete RP 52 / 55 MC: 7 BSCG 51 / 51 MC: 9 ASCG 12 / 38
Location: comp(35316..35855)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Variovorax sp. CF313 RepID=J2SXM2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 172.0
  • Bit_score: 144
  • Evalue 5.70e-32
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EJL70392.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 172.0
  • Bit_score: 144
  • Evalue 8.00e-32
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 172.0
  • Bit_score: 138
  • Evalue 1.50e-30

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGAGTTCCGGCTACGGGTTCGAGGGAGCGCTGCGGCCGCACTTCGCCGCCGCGCACAATCTTGCCCGCTGGCTGACGCGAACCCAGGCCGACGCCGAGGACGCACTGCAGGAATCGGTGTTGCGAGCTTTTCGATCGTGGCAAGCCGCCCGTCCCTCGAGCCCGCGAGCGTGGCTCCTGCGCATCGTGAGGAACTGCTGCTACGACCTGCGCAAGGAGCGCGACCGCGATCCGGTCGAGGGAGCCGTCGACGTGGACGCGATCGCCGAAGGCTCCAATGCCGTGGTGGGCCTCCCGGCAGACGGTCCCGAGGTGCGCCTTCTGCGCATGGCCGACGGCGAGGCGCTCCAGCACGCGCTCTTCGCGCTCGCGCCGGAGTTCCGCGAGGTCTTCCTGCTCCGCGAGATCGAAGGCCTCTCCTACAAGGAGATCGCCGACGTCGCGGGCGTTCCGATCGGGACGGTGATGTCGCGACTTTCGCGCGCACGCGCCCAGCTCCGGACGCTCCTCGCCGGCGAGAGGCGGAAGGAGACCGCATGA
PROTEIN sequence
Length: 180
MSSGYGFEGALRPHFAAAHNLARWLTRTQADAEDALQESVLRAFRSWQAARPSSPRAWLLRIVRNCCYDLRKERDRDPVEGAVDVDAIAEGSNAVVGLPADGPEVRLLRMADGEALQHALFALAPEFREVFLLREIEGLSYKEIADVAGVPIGTVMSRLSRARAQLRTLLAGERRKETA*