ggKbase home page

A1-18-all-fractions_k255_171502_1

Organism: A1-18-all-fractions_metab_conc_42

partial RP 36 / 55 MC: 4 BSCG 37 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(1..147)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IK57_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 45.0
  • Bit_score: 70
  • Evalue 2.90e-10
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 45.0
  • Bit_score: 70
  • Evalue 8.10e-11
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAK67415.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 45.0
  • Bit_score: 70
  • Evalue 4.00e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 147
ATGAATACATCGCAGTCGTTCGAGGAGGGGCTCACCGCGCTGCTTCCGCGGCTGAGGCGCTTTGCACATGCGCTATCGCGAAACTCATTCGATGCGGACGATCTGGTGCAGGCGACGGTCGAACGCGCACTTCGCTCTCGTGCTCAG
PROTEIN sequence
Length: 49
MNTSQSFEEGLTALLPRLRRFAHALSRNSFDADDLVQATVERALRSRAQ