ggKbase home page

A1-18-all-fractions_k255_4269916_36

Organism: A1-18-all-fractions_metab_conc_42

partial RP 36 / 55 MC: 4 BSCG 37 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(34170..34646)

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor GreB n=1 Tax=Sphingomonas elodea RepID=UPI0002631AA9 similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 159.0
  • Bit_score: 220
  • Evalue 7.20e-55
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 152.0
  • Bit_score: 215
  • Evalue 4.30e-53
greB; transcription elongation factor GreB similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 155.0
  • Bit_score: 211
  • Evalue 1.60e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
GTGGCTGATCGATACATCACTCCGACTGGGTTGGCTCGGATCCGTGCCGAATATGACGAGCTGTTCGGTGTTGAACGTCCAAAGATCGTAGAAACGGTTTCCTGGGCCGCATCGCTTGGCGATCGCTCGGAGAATGCCGATTATATTTACGGCAAGCGGCGGCTTCGCGAGATCGACCGCCGTCTTGCTCACCTCGCGCGCATCATGAAAGAAGCGAAAGTTGTCGATCCCGCAAAACAGCAAGTTCGGGACCAAGTGCGCTTCGGCGCAAAGGTCGAACTTGCCGACGAGAGTGACAATCGCCGCACCGTGACGATCGTTGGTAATGACGAAGCGGACGCGGGATCAGGCCTGATCAGCTGGAGCGCGCCCCTTGCCAGGGCCTTGATTGGAGCACGCGTGGGTGATGAACGCCTTGTGCGTCTTCCCGCAGGGGAGAAAAGCTATGAGGTCATCGACATCCGGTACCCGGACTAG
PROTEIN sequence
Length: 159
VADRYITPTGLARIRAEYDELFGVERPKIVETVSWAASLGDRSENADYIYGKRRLREIDRRLAHLARIMKEAKVVDPAKQQVRDQVRFGAKVELADESDNRRTVTIVGNDEADAGSGLISWSAPLARALIGARVGDERLVRLPAGEKSYEVIDIRYPD*