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A1-18-all-fractions_k255_2809641_3

Organism: A1-18-all-fractions_metab_conc_42

partial RP 36 / 55 MC: 4 BSCG 37 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(1026..1565)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 172.0
  • Bit_score: 251
  • Evalue 7.90e-64
UPI0003D06B20 related cluster n=1 Tax=unknown RepID=UPI0003D06B20 similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 172.0
  • Bit_score: 245
  • Evalue 4.10e-62
def; peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 174.0
  • Bit_score: 239
  • Evalue 6.30e-61

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Taxonomy

Sphingomonas sanxanigenens → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGGCCATCCGCCACATTTATGAAGCCCCAGATTCGGTTCTGCGACAGATCTCGAAGCCGGTGGAGCGATTCGATGACGAGCTGAAGACGCTTGTCACGGACATGTTCGAGACGATGTACGCAGCCCCTGGCATTGGTCTTGCGGCGGTGCAGGTAGGCGTACCGATCCGCCTATTAGTCATCGATCTTCAGGAACCGGAGGAAGAGGGCGGCGAGCCGGTTCGCGATCCCAGAGTGTTCATCAACCCCGAGATACTGTGGCACTCCGATACAGAAGTTCCTTACACGGAAGGCTGCCTCTCGGTGCCTGAGCAATATGCCGAGGTGATGCGGCCTGATAAGGTCCGCGCCCGCTGGCGCGATGTCGAGGGCGAGACTTGTGAGGAAGAGATCGACGGCCTGCTCGCTGTGTGCCTCCAACACGAAATGGACCACCTAAACGGTGTTCTATTCATCGACCATCTTTCGCGACTCAAACGCGACATGGTGCTAAAAAAGCTGGCTAAGTGGCGAAAAGAACAGGCTTTGAAAGCCGCCTAA
PROTEIN sequence
Length: 180
MAIRHIYEAPDSVLRQISKPVERFDDELKTLVTDMFETMYAAPGIGLAAVQVGVPIRLLVIDLQEPEEEGGEPVRDPRVFINPEILWHSDTEVPYTEGCLSVPEQYAEVMRPDKVRARWRDVEGETCEEEIDGLLAVCLQHEMDHLNGVLFIDHLSRLKRDMVLKKLAKWRKEQALKAA*