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A1-18-all-fractions_k255_1069776_4

Organism: A1-18-all-fractions_metab_conc_42

partial RP 36 / 55 MC: 4 BSCG 37 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(2584..6072)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 1159.0
  • Bit_score: 1665
  • Evalue 0.0
transcription-repair coupling factor n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488662 similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 1155.0
  • Bit_score: 1667
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 1159.0
  • Bit_score: 1665
  • Evalue 0.0

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Taxonomy

Sphingomonas sp. MM-1 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3489
ATGACTGAACATCTCCAGCGCGTGCTTAGCGCCGACGAACCGCTAACCCTCGCGGCTGTTCCGCAAGGCTTTTTGCCGTGGCTAGCAGCTGATCTAGCGCGCGCTGCAAATGCCCGCAGCAAGGGCGGCCGCGCTGTCGTGATCGTCGCAGACGAAGCGGCGATGCGCGCCGTCGCCGATACGGTGCCGCTCTTCGCGCCGGAGATCGAGGTTCTGACCCTGCCCGGCTGGGACTGCCTGCCATATGATCGCGCCTCACCAGCACTGCGAGTGATGGCAGAGCGACTGGCCACGCTAAGTTCACTCCAGTCGACGATCAGCAAGCCTCAGCTTCTGGTGGCGACTGCAAGCGCCGCATCACAACGAACACTGACGCCCTTCCGAGTCCGCCAGCTCACGCGCCGTATCGGTGAGGGTGAGCGTATTAGACACGAGGTGCTCGTCGAGCAGCTAAACGCGCTCGGCTACCAGCGCGCTGATACAGTCGCCGAGCAGGGCGAATATGCGGTGAGAGGCTCGCTCATCGACCTCTTCCCGGCGGGTCAAGAACTCGCGCTCCGCGTCGATTTCTTTGGTGACGAGATCGACAGTGTTCGACGCTTCGACGCAACCGATCAGCGCTCGACCGACAAAGCGGAAGCCTTCACGCTCATGCCCGCCTCCGAAGCCCTGCTGGACGTGGACAGCATCAAGCGCTTCCGCTCCCGATACCGGGAGAAGTTCGGAGCAACGGCCACTCAGGACCCTCTATATCAGGCGCTCTCTGATGGCCGTCGGATGGCCGGCATGGAGCATTGGCTGCCGCTGCTGGAGGAACGGCTTGGGACTTTGTTCGATCACCTTGCCGAACACGACATCCTCCTCCGCGACGCTTCGGCAGACCAGGCGCTCACCAGTCGGCGCGAGGCAATCGAGGACTATTACCATAACCGAGTTCGGGCGATGCAGGATGAATCCGGCAGCTACCGGCCGCTTGAGCCCGACACGCTGTACGTCGGCAAAGATGAATGGTCGAACCTTGTCTTGGACGGGCCGATCCATCTTGCTTCTCCATTTCCCGAACCAGAATCCGGCTCCGTCATCGATTTCGCTGTCCAGCCCGCGCGCGACTTCGCGCCCGAACGCGCACAACAGGCGAACATTTACGAAGCTGTCGCCAAGCACATCGGCGAACTTCGAAGGAAGGGCCGCAAGGTAGTTCTTGCGAGCTACACCGCAGGCGCGCGCGAGCGGCTCTCTGGCTTGCTTGAGGATCACGGACTCAAATCACACAAGCAGGTGGACACGTGGCAGGAGGCGCTCGGCGCCAAAACTCAGCCAGCCCTGCTGGTGCTGCCATTAGATCATGGCTTCACCACTCCCGAAGTCGCTGTGCTCACCGAGCAGGACATGCTCGGTGACCGGCTCGTCCGGCGGCGCAAGAAACGCAAGGCTGCCGATGCGTTCCTCCAGGAGCTCGCGACTCTCTCGCCCGGAGACCTCGTCGTCCACCAGGATCACGGCATCGGTCGATACGAAGGTCTAACCCAGATTCCCGTCAGTCGCGTCCCGCATGACTGTGTCGCGCTCGAATATGCACGGGGGGACAAGCTTTATGTCCCCGTCGAGAACATCGAGCTTCTGACCCGCTACGGCAGCGAGAGCGATGGGGTGACCCTCGACAGTCTGGGCGGCGAAGCGTGGCAGCGGCGCAAGTCGCGGATGAAGGAGCGCATTCGTGAAATCGCAGGCGAACTCATCAAGGTTGCAGCGCTGCGTGCAACGCGTGCCGGGATCATCGCAGAGGCCGATGCCAGCTACCCGGCCTTCGTCGATCGATTCCCTTACGAAGAAACAGATGATCAGGACCGCGCGATCGCAGATGTTCTCAGCGATCTCGAAGCAGGCAAGCCGATGGACCGGCTGGTCTGCGGCGATGTCGGGTTCGGTAAAACCGAGGTAGCGCTACGCGCCGCCTTCGTGATGGCAATGTCAGGCCGACAGGTGGCGCTCGTGTGTCCGACGACGTTGCTCGCGCGGCAGCACTACAAGAATTTTATCGACCGTCTCCAAGGCTTCCCGCTGAACGTGGGCAGATTGTCACGTCTCGTACCTGCTGCGGAAGCAAAGAAGACCAAAGAAGGACTCACCGCCGGAACTGTGGACATCGTGGTTGGGACCCATGCGATCCTATCCAAAAGTGTTCAGTTCAAGCGTCTCGGTCTCGTGATAGTTGACGAAGAACAGCATTTCGGGGTCGCTCACAAGGAGCGATTGAAGGCGCTCAAGGCCGACGTCCACGTCCTCACTTTGACCGCGACACCGATACCGCGGACGTTGCAGATGGCGATGAGCGGCTTGCGCGAACTTTCGGTCATACAGACCCCGCCGGTCGACCGCCTAGCCGTGCGCACCTACGTGGCGCCTTGGGACGCGGTTGTTCTGCGTGAAGCGCTCCTTCGAGAGCATTATCGTGGCGGTCAGAGCTTCTTTGTTGCCCCGAGGGTCGCCGATCTTCCCGACATGGAAGAATGGCTACGTTCCCAGGTTCCGGAGGTGAAGTTCATCACCGCTCACGGACAGATGAGCGCAAACGAAGTCGAAGAGCGAATGAGCGCCTTCTACGATCGCAAATATGACGTGCTCCTGTCGACCACCATAGTCGAAAGCGGGCTCGACATTCCCAGCGCCAACACGCTGATCGTGTACCGTTCCGATCGCTTCGGTCTTGCACAATTGTATCAGCTTCGTGGCCGCGTGGGCCGGTCGAAGACCCGAGCATATGCATATCTTACGATACCTTCGGACCGGTCGATTACAGAAACGGCGCAGAAGCGCCTCCACGTGCTCGCTGAACTCGATAGTCTCGGCGCTGGCTTCCAGCTCGCAAGCCACGACTTGGACATTCGGGGCGCGGGCAATTTGCTCGGCGACGAGCAGTCGGGCCATATCAAGGAGGTTGGTTTCGAACTCTACCAGTCGATGCTCGAGGACGCGATTGTCGAGCTGAGGGCTGGTGGCGTACCGCAGCGCGAAGAGTTCACTCCACAGATCAGCGTCGACGCACCGATCATGATTCCCGAAACGTACGTTCCGGATCTTGACCTCCGAATGGGGCTTTACCGGCGCTTGGGCGAGCTCGAGGATCGCTCAGCGATCGATGCGTTTGCTGCCGAGCTTATTGACCGGTTTGGTACGCTTCCTGCGGAGACAGCGAATTTGATGAAAATCGTCGAGGTGAAGCTCAACTGCCGCGAGGCACTCGTAGCCAAGCTCGACATTGGTCCCAAAGGAGCAGTCGTGACGTTTGCCGATAGCGGATTCCCGGACCTGGCGGGGCTTCTGGGTTATATCGATCGTCTGAAGGGCTCGGCAAAGCTTCGGCCGGACAGCAAGATGAGTGTGTCGCGCGATTGGCCCACACCGGAAGCGCGCCTCAACGGAGCGCTGCAGCTATCGCGCGGGCTCGCTCGCGTCGCGGTCGCCGGGGAGAAGAAGCAGGCGGCCTAA
PROTEIN sequence
Length: 1163
MTEHLQRVLSADEPLTLAAVPQGFLPWLAADLARAANARSKGGRAVVIVADEAAMRAVADTVPLFAPEIEVLTLPGWDCLPYDRASPALRVMAERLATLSSLQSTISKPQLLVATASAASQRTLTPFRVRQLTRRIGEGERIRHEVLVEQLNALGYQRADTVAEQGEYAVRGSLIDLFPAGQELALRVDFFGDEIDSVRRFDATDQRSTDKAEAFTLMPASEALLDVDSIKRFRSRYREKFGATATQDPLYQALSDGRRMAGMEHWLPLLEERLGTLFDHLAEHDILLRDASADQALTSRREAIEDYYHNRVRAMQDESGSYRPLEPDTLYVGKDEWSNLVLDGPIHLASPFPEPESGSVIDFAVQPARDFAPERAQQANIYEAVAKHIGELRRKGRKVVLASYTAGARERLSGLLEDHGLKSHKQVDTWQEALGAKTQPALLVLPLDHGFTTPEVAVLTEQDMLGDRLVRRRKKRKAADAFLQELATLSPGDLVVHQDHGIGRYEGLTQIPVSRVPHDCVALEYARGDKLYVPVENIELLTRYGSESDGVTLDSLGGEAWQRRKSRMKERIREIAGELIKVAALRATRAGIIAEADASYPAFVDRFPYEETDDQDRAIADVLSDLEAGKPMDRLVCGDVGFGKTEVALRAAFVMAMSGRQVALVCPTTLLARQHYKNFIDRLQGFPLNVGRLSRLVPAAEAKKTKEGLTAGTVDIVVGTHAILSKSVQFKRLGLVIVDEEQHFGVAHKERLKALKADVHVLTLTATPIPRTLQMAMSGLRELSVIQTPPVDRLAVRTYVAPWDAVVLREALLREHYRGGQSFFVAPRVADLPDMEEWLRSQVPEVKFITAHGQMSANEVEERMSAFYDRKYDVLLSTTIVESGLDIPSANTLIVYRSDRFGLAQLYQLRGRVGRSKTRAYAYLTIPSDRSITETAQKRLHVLAELDSLGAGFQLASHDLDIRGAGNLLGDEQSGHIKEVGFELYQSMLEDAIVELRAGGVPQREEFTPQISVDAPIMIPETYVPDLDLRMGLYRRLGELEDRSAIDAFAAELIDRFGTLPAETANLMKIVEVKLNCREALVAKLDIGPKGAVVTFADSGFPDLAGLLGYIDRLKGSAKLRPDSKMSVSRDWPTPEARLNGALQLSRGLARVAVAGEKKQAA*