ggKbase home page

A1-18-all-fractions_k255_1256966_5

Organism: A1-18-all-fractions_metab_conc_42

partial RP 36 / 55 MC: 4 BSCG 37 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 2318..3388

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 356.0
  • Bit_score: 603
  • Evalue 1.60e-169
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 354.0
  • Bit_score: 599
  • Evalue 6.20e-169
DNA-directed RNA polymerase subunit alpha n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=RPOA_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 354.0
  • Bit_score: 599
  • Evalue 2.20e-168

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. SRS2 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
ATGGCCGTCAACGCAAAGAACTGGCAGGAACTGAAGAAGCCCAACGCGCTCGAGAAGAAGCAGTCCGGAGGCGACAGCCGCCGCCGCGCCGTCTTCGTCGCCGAGCCGCTGGAGCGCGGCTTCGGCATGACGCTCGGCAACTCGCTGCGCCGCGTGCTCCTGTCCTCGCTTCAGGGTGCCGCCGTCACCTCCATCAAGATAGACGGCGTGCTGCATGAGTTCAGCTCGCTTGCCGGCGTCCGCGAGGACGTCACCGACATTGTTCTCAACGTGAAGCAGATCGCGCTGAAGATGGAAGGCGAGGGGCCGCGTCGCCTCCACCTTTCCGCGACTGGCCCGGCGGAAGTCACCGCGGGTTTGATCGCCACCACGGGCGACATCGAGGTGACCAACCCGGATCTGGTGATCTGCCACCTGGACGAGGGCGCCACGCTCAACATTGAGCTGACGGCCGACATTGGAAAGGGCTATCAGCCGGCCGTCGCGAACCGGCCCGCCGATGCTCCGATCGGCCTCATCCCGGTCGACGCGCTCTACAGCCCGGTGCGTCAGGTCGCATATAAGGTCGAGAACACCCGCGTGGGCCAGGAGCTCGATTACGACAAGCTCACTCTGACCATCGAGACGGATGGTACGGTGACGCCTGAGGACGCGCTTGGTTATGCGGCGCGGATCCTCCAGGACCAGCTGCAGCTCTTCGTCCACTTCGACGAGAGCCAGGTGCGCATGGCTCCCTCGCCGATGATCGGCCAGGCCGTGCCGATGGCTGCCGAGGCGCCGACCGACACGAACCAGCTCAACCGCTATCTGCTCAAGAAGGTTGATGAGCTCGAGCTGTCAGTGCGCAGCGCCAACTGCCTCAAGAACGACAATATCATCTATATCGGTGACCTCGTTCAGAAGACCGAAGCCGAAATGCTCCGGACGCCGAACTTCGGCCGGAAGAGCCTCAACGAGATCAAGGAAGTGCTCGCGAGCATGGGCCTTCGTCTCGGCATGGACATCCCTGGTTGGCCGCCCGAGAACATCGAGGAAATGGCGAAGAAACTCGAACAGGAGATGCTGGGCTAA
PROTEIN sequence
Length: 357
MAVNAKNWQELKKPNALEKKQSGGDSRRRAVFVAEPLERGFGMTLGNSLRRVLLSSLQGAAVTSIKIDGVLHEFSSLAGVREDVTDIVLNVKQIALKMEGEGPRRLHLSATGPAEVTAGLIATTGDIEVTNPDLVICHLDEGATLNIELTADIGKGYQPAVANRPADAPIGLIPVDALYSPVRQVAYKVENTRVGQELDYDKLTLTIETDGTVTPEDALGYAARILQDQLQLFVHFDESQVRMAPSPMIGQAVPMAAEAPTDTNQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEAEMLRTPNFGRKSLNEIKEVLASMGLRLGMDIPGWPPENIEEMAKKLEQEMLG*