ggKbase home page

A1-18-all-fractions_k255_1353467_5

Organism: A1-18-all-fractions_metab_conc_42

partial RP 36 / 55 MC: 4 BSCG 37 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 4620..5552

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 309.0
  • Bit_score: 386
  • Evalue 2.70e-104
tRNA pseudouridine synthase B n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQ16_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 310.0
  • Bit_score: 383
  • Evalue 1.30e-103
truB; tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 310.0
  • Bit_score: 383
  • Evalue 3.60e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas changbaiensis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 933
GTGCTTCACGGCTGGATCATCCTCGACAAGCCAGTCGGCCTCGGCTCGACCACCGCCGTCAGCGCGGTCAAGCGCATCCTGCGCGAAGCTCACGAACCGAAGACCAAGGTGGGTCATGGCGGCACGCTCGACCCGCTCGCCAGCGGCGTCCTCCCGATCGCCCTTGGTGAGGCAACGAAGCTCTGTGGCCGAATGCTCGACGCGAGCAAGGCTTACGACTTCACCATTCGGTTCGGGGAGGAGACCGATACGCTCGACGCGGAAGGTCAAGTCGTCGCAACCAGCGACGTTCGGCCGACGCTCAGGCAAATCGCAGCAGTCATCCAACGCTTCACCGGCGACATCGAGCAGGTGCCGCCGCGCTATTCCGCAATAAAGATCGGCGGGAAGGCTGCATATGCGCGGGCGCGCAGCGGCGAAGAAGTCGAGATGCGTACGAGACCTGTTCGGGTGCATCGGCTGATCATTCGTCCTGACAGCGCGAAAGATGAGGACGAGAGCGAGGCCGGAGACTCCGCCGACCAGCGCGTCGCCGAAGTCACCCTTTCGGCAAGTGTTTCCAAAGGCACTTACATCCGTAGCCTTGCACGTGATGTCGCTCAGGCGCTTGGAACCGTTGGCCATGTCTCTTATCTCAGGCGTACCCGCGCGGGTGCCTTTTCCCTCGAGCAAGCCATTTCTCTGGACTTTCTCGAGGAAGCCGCTAAGGCCCGCGCACTGACGAGGACGGTACTGCCGCTCGATGCGGCGCTGGACGACATCCCGGCCCTCCCCGTCACTCCCGACCAAGCGCAGCTGCTCCGTCACGGGCAGAAGCTTGCCGGGATCCCCGCACAGCCGGGGCTTTGCATGGCAACGCTGGAGGGAACTCCAGTCGCGCTCATTGAAGCCACGGCCGACGGCCTCAGGGTCGTCAGGGGTTTCAACCTTTAG
PROTEIN sequence
Length: 311
VLHGWIILDKPVGLGSTTAVSAVKRILREAHEPKTKVGHGGTLDPLASGVLPIALGEATKLCGRMLDASKAYDFTIRFGEETDTLDAEGQVVATSDVRPTLRQIAAVIQRFTGDIEQVPPRYSAIKIGGKAAYARARSGEEVEMRTRPVRVHRLIIRPDSAKDEDESEAGDSADQRVAEVTLSASVSKGTYIRSLARDVAQALGTVGHVSYLRRTRAGAFSLEQAISLDFLEEAAKARALTRTVLPLDAALDDIPALPVTPDQAQLLRHGQKLAGIPAQPGLCMATLEGTPVALIEATADGLRVVRGFNL*