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A1-18-all-fractions_k255_1154143

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_1154143_1
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..634)
DNA (633bp) protein (211aa)
Transcriptional regulator, AraC family protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6LAZ2_9RHOB
Transcriptional regulator, AraC family protein {ECO:0000313|EMBL:EJW10528.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
transcriptional regulator
A1-18-all-fractions_k255_1154143_2
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(746..1300)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035F574A
Conserved protein of DIM6/NTAB family {ECO:0000313|EMBL:EIM25653.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hpaC; 4-hydroxyphenylacetate 3-monooxygenase reductase component
A1-18-all-fractions_k255_1154143_3
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1307..2881)
DNA (1575bp) protein (525aa)
hpaB; 4-hydroxyphenylacetate 3-monooxygenase large subuit (EC:1.14.14.3)
Aromatic ring hydroxylase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QQV8_9BRAD
Pyoverdin chromophore biosynthetic protein pvcC {ECO:0000313|EMBL:ETR77312.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
A1-18-all-fractions_k255_1154143_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3146..4066
DNA (921bp) protein (307aa)
High-affinity branched-chain amino acid transport system permease protein LivH n=1 Tax=Rhodovulum sp. PH10 RepID=J6UBH0_9RHOB
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:EJW10526.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
inner-membrane translocator
A1-18-all-fractions_k255_1154143_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4068..5480
DNA (1413bp) protein (471aa)
Branched-chain amino acid transport system permease protein LivM n=1 Tax=Rhodovulum sp. PH10 RepID=J6J047_9RHOB
Branched-chain amino acid transport system permease {ECO:0000313|EMBL:KFC67641.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
branched-chain amino acid transport system / permease component family protein
A1-18-all-fractions_k255_1154143_6
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5477..6433
DNA (957bp) protein (319aa)
ATP-binding protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UCI5_9RHOB
ATP-binding protein {ECO:0000313|EMBL:EJW10524.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
ABC transporter
A1-18-all-fractions_k255_1154143_7
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

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6459..7439
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJD6_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
A1-18-all-fractions_k255_1154143_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7510..8235
DNA (726bp) protein (242aa)
amino acid ABC transporter ATPase n=1 Tax=Xanthobacteraceae RepID=UPI00035EF407
ABC transporter
Branched-chain amino acid transport system ATP-binding protein {ECO:0000313|EMBL:KFC67643.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
A1-18-all-fractions_k255_1154143_9
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8238..8630
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RGR8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESR22460.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
hypothetical protein
A1-18-all-fractions_k255_1154143_10
bacterium YEK0313, Bacteria

Not on your lists

8724..9842
DNA (1119bp) protein (373aa)
Periplasmic binding protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UBG6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:CEJ13686.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
extracellular ligand-binding receptor
A1-18-all-fractions_k255_1154143_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10235..10969)
DNA (735bp) protein (245aa)
Cytochrome c biogenesis protein, transmembrane region n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13A79_RHOPS
cytochrome c biogenesis protein, transmembrane region
Cytochrome c biogenesis protein, transmembrane region {ECO:0000313|EMBL:ABE39010.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
A1-18-all-fractions_k255_1154143_12
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11099..12088
DNA (990bp) protein (330aa)
Peptidase S58 DmpA n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A174_STAND
peptidase S58 DmpA
Peptidase S58 DmpA {ECO:0000313|EMBL:ADH89432.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
A1-18-all-fractions_k255_1154143_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12373..13470
DNA (1098bp) protein (366aa)
Polysaccharide deacetylase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q135R9_RHOPS
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ABE40170.1}; Flags: Precursor;; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
A1-18-all-fractions_k255_1154143_14
unknown

Not on your lists

comp(13646..13846)
DNA (201bp) protein (67aa)

This feature has no annotations

A1-18-all-fractions_k255_1154143_15
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13857..14291)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U986_METS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA15357.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
A1-18-all-fractions_k255_1154143_16
unknown

Not on your lists

comp(14550..14714)
DNA (165bp) protein (55aa)

This feature has no annotations

A1-18-all-fractions_k255_1154143_17
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14862..16109)
DNA (1248bp) protein (416aa)
D-amino-acid dehydrogenase (EC:1.4.99.1)
D-amino-acid dehydrogenase {ECO:0000313|EMBL:ADH88965.1}; EC=1.4.99.1 {ECO:0000313|EMBL:ADH88965.1};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
D-amino acid dehydrogenase n=1 Tax=Xanthobacteraceae RepID=UPI00037B9F54
A1-18-all-fractions_k255_1154143_18
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16305..16991
DNA (687bp) protein (229aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
rpe; ribulose-phosphate 3-epimerase Rpe (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=2 Tax=Bradyrhizobiaceae RepID=F7QPG7_9BRAD
A1-18-all-fractions_k255_1154143_19
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16991..17968
DNA (978bp) protein (326aa)
glutathione transferase (EC:2.5.1.18)
Glutathione transferase n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SHP1_9CYAN
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
A1-18-all-fractions_k255_1154143_20
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18161..20737
DNA (2577bp) protein (859aa)
MscS Mechanosensitive ion channel n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I5C7_RHOVT
mechanosensitive ion channel MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ADP71648.1}; Flags: Precursor;; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
A1-18-all-fractions_k255_1154143_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20922..21299
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NWP6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32919.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
A1-18-all-fractions_k255_1154143_22
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21281..21556)
DNA (276bp) protein (92aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Rhodovulum sp. PH10 RepID=J6IY21_9RHOB
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX
A1-18-all-fractions_k255_1154143_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21572..23191)
DNA (1620bp) protein (540aa)
RNA polymerase sigma factor RpoD n=1 Tax=Afipia birgiae RepID=UPI0002E6C825
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
RNA polymerase sigma factor RpoD
Displaying 23 items

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