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A1-18-all-fractions_k255_1370713

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Displaying items 61-90 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_1370713_61
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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59414..60553
DNA (1140bp) protein (380aa)
cytochrome C biogenesis protein n=1 Tax=Afipia birgiae RepID=UPI0002DE6B31
Cytochrome C biogenesis protein {ECO:0000313|EMBL:KJC48627.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
cytochrome C biogenesis protein
A1-18-all-fractions_k255_1370713_62
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60550..61026
DNA (477bp) protein (159aa)
cytochrome C biogenesis protein CcdA n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003703215
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
cycJ; cytochrome C biogenesis protein CcmE
A1-18-all-fractions_k255_1370713_63
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61070..63052
DNA (1983bp) protein (661aa)
Cytochrome c heme lyase subunit CcmF n=1 Tax=Rhodovulum sp. PH10 RepID=J5PEM4_9RHOB
cytochrome c-type biogenesis protein CcmF
Cytochrome c heme lyase subunit CcmF {ECO:0000313|EMBL:EJW10177.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
A1-18-all-fractions_k255_1370713_64
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63060..63542
DNA (483bp) protein (161aa)
Cytochrome C biogenesis protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A5E0_STAND
cytochrome C biogenesis protein
Cytochrome C biogenesis protein {ECO:0000313|EMBL:ADH88064.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
A1-18-all-fractions_k255_1370713_65
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63711..65234
DNA (1524bp) protein (508aa)
serine protease do-like (EC:3.4.21.-)
Serine protease protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UBU2_9RHOB
Serine protease protein {ECO:0000313|EMBL:EJW10184.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
A1-18-all-fractions_k255_1370713_66
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65529..66203
DNA (675bp) protein (225aa)
Response regulator in two-component regulatory system with PhoQ n=1 Tax=Rhodovulum sp. PH10 RepID=J6IYL2_9RHOB
Response regulator in two-component regulatory system with PhoQ {ECO:0000313|EMBL:EJW10185.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
winged helix family two component transcriptional regulator
A1-18-all-fractions_k255_1370713_67
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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66247..67650
DNA (1404bp) protein (468aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q217N2_RHOPB
periplasmic sensor signal transduction histidine kinase
A1-18-all-fractions_k255_1370713_68
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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67812..70790
DNA (2979bp) protein (993aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase (EC:2.7.7.42)
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PEP1_9RHOB
A1-18-all-fractions_k255_1370713_69
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70829..73201)
DNA (2373bp) protein (791aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q217N0_RHOPB
multi-sensor signal transduction histidine kinase
A1-18-all-fractions_k255_1370713_70
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73452..76127)
DNA (2676bp) protein (892aa)
Membrane alanine aminopeptidase N n=1 Tax=Rhodovulum sp. PH10 RepID=J6UBU8_9RHOB
Membrane alanine aminopeptidase N {ECO:0000313|EMBL:EJW10194.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
aminopeptidase N
A1-18-all-fractions_k255_1370713_71
bacterium YEK0313, Bacteria

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76272..77237
DNA (966bp) protein (322aa)
Extra-cytoplasmic Solute Receptor n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LM41_RALME
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:CEJ10834.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
bug; extra-cytoplasmic solute receptor protein
A1-18-all-fractions_k255_1370713_72
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77310..78320
DNA (1011bp) protein (337aa)
alcohol dehydrogenase n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003677224
zinc-binding alcohol dehydrogenase family protein
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:ACB94558.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
A1-18-all-fractions_k255_1370713_73
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78353..79807)
DNA (1455bp) protein (485aa)
Cobalt-zinc-cadmium resistance protein n=1 Tax=Rhodovulum sp. PH10 RepID=J9DSE4_9RHOB
Cobalt-zinc-cadmium resistance protein {ECO:0000313|EMBL:EJW09357.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
cation-efflux pump
A1-18-all-fractions_k255_1370713_74
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80103..81065
DNA (963bp) protein (321aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
dusA; tRNA-dihydrouridine synthase A (EC:1.-.-.-)
tRNA-dihydrouridine synthase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UEL2_9RHOB
A1-18-all-fractions_k255_1370713_75
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81092..81925
DNA (834bp) protein (278aa)
membrane protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000314175C
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
A1-18-all-fractions_k255_1370713_76
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81929..82627)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6J6G8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW11740.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
aspartyl protease
A1-18-all-fractions_k255_1370713_77
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82957..83589
DNA (633bp) protein (211aa)
Glutathione S-transferase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MA75_9RHIZ
Glutathione S-transferase {ECO:0000313|EMBL:EKF17905.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
glutathione S-transferase
A1-18-all-fractions_k255_1370713_78
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83592..84335
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030754BF
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ACK50299.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
A1-18-all-fractions_k255_1370713_79
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84365..85234)
DNA (870bp) protein (290aa)
Putative oxidoreductase 3-hydroxyisobutyrate dehydrogenase n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RRP8_9BRAD
Oxidoreductase {ECO:0000313|EMBL:KJC51248.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
dehydrogenase
A1-18-all-fractions_k255_1370713_80
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85399..86523
DNA (1125bp) protein (375aa)
Scaffold protein for [4Fe-4S] cluster assembly ApbC n=1 Tax=Rhodovulum sp. PH10 RepID=J6UDZ3_9RHOB
Scaffold protein for [4Fe-4S] cluster assembly ApbC {ECO:0000313|EMBL:EJW11736.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
ParA/MinD-like ATPase
A1-18-all-fractions_k255_1370713_81
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86543..87232)
DNA (690bp) protein (230aa)
Haloacid dehalogenase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4J2_9RHIZ
haloacid dehalogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
A1-18-all-fractions_k255_1370713_82
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87317..87979)
DNA (663bp) protein (221aa)
PKHD-type hydroxylase X566_14540 {ECO:0000256|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000256|HAMAP-Rule:MF_00657};; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hydroxylase (EC:1.14.11.-)
PKHD-type hydroxylase MicloDRAFT_00067030 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPT2_9RHIZ
A1-18-all-fractions_k255_1370713_83
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88199..89065
DNA (867bp) protein (289aa)
hypothetical protein, partial n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003628F50
Uncharacterized protein {ECO:0000313|EMBL:EIM25973.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
A1-18-all-fractions_k255_1370713_84
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89072..90421
DNA (1350bp) protein (450aa)
di-heme cytochrome c peroxidase (EC:1.11.1.5)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003621C3C
Cytochrome c peroxidase {ECO:0000313|EMBL:EIM25972.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
A1-18-all-fractions_k255_1370713_85
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90558..91646
DNA (1089bp) protein (363aa)
ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035C6276
TRAP transporter solute receptor {ECO:0000313|EMBL:KFC63914.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
TRAP transport system, substrate-binding protein
A1-18-all-fractions_k255_1370713_86
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91717..92805
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PTH9_9BRAD
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR74761.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
twin-arginine translocation pathway signal
A1-18-all-fractions_k255_1370713_87
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93029..94117
DNA (1089bp) protein (363aa)
Mannitol-binding protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GFM7_9BRAD
mannitol-binding protein
Mannitol-binding protein {ECO:0000313|EMBL:BAL79564.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
A1-18-all-fractions_k255_1370713_88
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94154..95821)
DNA (1668bp) protein (556aa)
C4-dicarboxylate ABC transporter n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036B6689
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:EJZ32008.1}; Flags: Fragment;; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
TRAP C4-dicarboxylate transport system permease DctM subunit precursor
A1-18-all-fractions_k255_1370713_89
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95852..96448)
DNA (597bp) protein (199aa)
Glutamate transport protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IAL7_AZOC5
dctQ; glutamate transporter
Glutamate transport protein {ECO:0000313|EMBL:BAF88521.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
A1-18-all-fractions_k255_1370713_90
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96633..97670)
DNA (1038bp) protein (346aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
Cyclic pyranopterin monophosphate synthase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YN90_9RHIZ
molybdenum cofactor biosynthesis protein A
Displaying items 61-90 of 95 in total

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