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A1-18-all-fractions_k255_1635621

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Displaying items 31-60 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_1635621_31
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30370..31305
DNA (936bp) protein (312aa)
SAM-dependent methyltransferase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UDN6_9RHOB
SAM-dependent methyltransferase {ECO:0000313|EMBL:EJW11089.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
methyltransferase
A1-18-all-fractions_k255_1635621_32
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31343..31741)
DNA (399bp) protein (133aa)
NTP pyrophosphohydrolase n=1 Tax=Methylopila sp. M107 RepID=UPI000364BCC1
mutator MutT protein
Mutator MutT protein {ECO:0000313|EMBL:ABS63352.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
A1-18-all-fractions_k255_1635621_33
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31868..33109)
DNA (1242bp) protein (414aa)
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein (EC:2.3.1.1 2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Rhodovulum sp. PH10 RepID=J6UCD9_9RHOB
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
A1-18-all-fractions_k255_1635621_34
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33287..34225)
DNA (939bp) protein (313aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B41C48
PpiC-type peptidyl-prolyl cis-trans isomerase
A1-18-all-fractions_k255_1635621_35
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34577..37384
DNA (2808bp) protein (936aa)
Protein translocase subunit SecA n=1 Tax=Rhodovulum sp. PH10 RepID=J6LCK1_9RHOB
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
preprotein translocase subunit SecA
A1-18-all-fractions_k255_1635621_36
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37503..38825)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07VD4_RHOP5
Uncharacterized protein {ECO:0000313|EMBL:ETR77467.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
A1-18-all-fractions_k255_1635621_37
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39228..40184)
DNA (957bp) protein (319aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P1V6_9BRAD
A1-18-all-fractions_k255_1635621_38
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(40381..41217)
DNA (837bp) protein (279aa)
Permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IGQ5_9BRAD
Permease {ECO:0000313|EMBL:ERF81654.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
A1-18-all-fractions_k255_1635621_39
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41270..42217)
DNA (948bp) protein (316aa)
Tyrosine recombinase XerD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQW9_NITHX
tyrosine recombinase XerD
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
A1-18-all-fractions_k255_1635621_40
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42232..42387)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P751_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37301.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
histidine kinase
A1-18-all-fractions_k255_1635621_41
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42591..43223
DNA (633bp) protein (211aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UIP8_9RHOB
A1-18-all-fractions_k255_1635621_42
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43220..44353
DNA (1134bp) protein (378aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
3-dehydroquinate synthase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TTR7_9BRAD
shikimate kinase
A1-18-all-fractions_k255_1635621_43
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44350..45639
DNA (1290bp) protein (430aa)
Thioredoxin reductase (NADPH) n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H5L7_9BRAD
HlyC/CorC family of transporters with 2 CBS domains
Putative HlyC/CorC family of transporters with 2 CBS domains {ECO:0000313|EMBL:AEI05160.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
A1-18-all-fractions_k255_1635621_44
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45689..45964)
DNA (276bp) protein (92aa)
Stress-induced morphogen n=3 Tax=Rhizobiales RepID=H5Y755_9BRAD
BolA family transcriptional regulator {ECO:0000313|EMBL:ETR77458.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
A1-18-all-fractions_k255_1635621_45
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46073..46708
DNA (636bp) protein (212aa)
DnaJ-like domain protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UC84_9RHOB
DnaJ-like domain protein {ECO:0000313|EMBL:EJW10901.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
heat shock protein DnaJ domain-containing protein
A1-18-all-fractions_k255_1635621_46
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46939..47925
DNA (987bp) protein (329aa)
cobalt chelatase small subunit (EC:6.6.1.2)
Aerobic cobaltochelatase CobS subunit n=1 Tax=Rhodovulum sp. PH10 RepID=J5PIJ7_9RHOB
Aerobic cobaltochelatase CobS subunit {ECO:0000313|EMBL:EJW10902.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
A1-18-all-fractions_k255_1635621_47
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47953..49836
DNA (1884bp) protein (628aa)
cobalt chelatase large subunit (EC:6.6.1.2)
cobalt chelatase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037DA523
Bradyrhizobium elkanii strain UASWS1015 Contig172, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49754.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
A1-18-all-fractions_k255_1635621_48
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49833..50894
DNA (1062bp) protein (354aa)
twin-arginine translocation pathway signal n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034CFA88
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD86116.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
A1-18-all-fractions_k255_1635621_49
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(50954..51247)
DNA (294bp) protein (98aa)
50S ribosomal protein L28 n=1 Tax=Afipia birgiae RepID=UPI000315E87E
rpmB; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000255|HAMAP-Rule:MF_00373}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
A1-18-all-fractions_k255_1635621_50
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51606..52457
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6LCB6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW10913.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
A1-18-all-fractions_k255_1635621_51
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53197..56574
DNA (3378bp) protein (1126aa)
ATP-dependent DNA Helicase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UC91_9RHOB
ATP-dependent DNA Helicase {ECO:0000313|EMBL:EJW10911.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
ATP-dependent RNA and DNA helicase
A1-18-all-fractions_k255_1635621_52
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56586..56891
DNA (306bp) protein (102aa)
Ribosome-associated heat shock protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6J201_9RHOB
Ribosome-associated heat shock protein {ECO:0000313|EMBL:EJW10910.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
RNA-binding S4
A1-18-all-fractions_k255_1635621_53
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56971..57309
DNA (339bp) protein (113aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IR07_METNO
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ACL56709.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
A1-18-all-fractions_k255_1635621_54
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57707..58285
DNA (579bp) protein (193aa)
CarD-like transcriptional regulator n=1 Tax=Rhodovulum sp. PH10 RepID=J5PIK4_9RHOB
CarD-like transcriptional regulator {ECO:0000313|EMBL:EJW10907.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
CarD family transcriptional regulator
A1-18-all-fractions_k255_1635621_55
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58731..59402
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J1T6_RHOP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD05574.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
A1-18-all-fractions_k255_1635621_56
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59835..61400
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036C557F
UbiD-type (de) carboxylyase-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
A1-18-all-fractions_k255_1635621_57
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61657..61866
DNA (210bp) protein (70aa)
Transcriptional regulator, ArsR family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YB35_MESOW
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AEH85441.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
A1-18-all-fractions_k255_1635621_58
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

61859..62320
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000380F998
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA30518.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
A1-18-all-fractions_k255_1635621_59
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

62472..63935
DNA (1464bp) protein (488aa)
mhpA; monooxygenase (EC:1.14.13.127)
Monooxygenase {ECO:0000313|EMBL:AGY58804.1}; EC=1.14.13.127 {ECO:0000313|EMBL:AGY58804.1};; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
Monooxygenase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QMK5_9CYAN
A1-18-all-fractions_k255_1635621_60
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

63965..64402
DNA (438bp) protein (146aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Streptomyces sp. e14 RepID=D6K4T0_9ACTO
3-demethylubiquinone-9 3-methyltransferase
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
Displaying items 31-60 of 72 in total

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