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A1-18-all-fractions_k255_2183794

Search features with annotation key words

Displaying items 61-90 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_2183794_61
Brucella sp. 83/13, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58877..59452
DNA (576bp) protein (192aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=520449 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. 83/13.;"
NADH-quinone oxidoreductase subunit B n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=NUOB_SINMW
nuoB; nuoB
A1-18-all-fractions_k255_2183794_62
bacterium YEK0313, Bacteria

Not on your lists

59466..60077
DNA (612bp) protein (204aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
NADH dehydrogenase subunit C (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit C n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0THJ9_9BRAD
A1-18-all-fractions_k255_2183794_63
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60085..61275
DNA (1191bp) protein (397aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit D n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6I6_9BRAD
A1-18-all-fractions_k255_2183794_64
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61275..62024
DNA (750bp) protein (250aa)
NADH dehydrogenase subunit E (EC:1.6.5.3)
NADH-ubiquinone oxidoreductase chain E n=1 Tax=Rhodovulum sp. PH10 RepID=J6J1L0_9RHOB
NADH-ubiquinone oxidoreductase chain E {ECO:0000313|EMBL:EJW10820.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
A1-18-all-fractions_k255_2183794_65
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62024..63325
DNA (1302bp) protein (434aa)
nuoF; NADH dehydrogenase I subunit F (EC:1.6.5.3 1.6.99.5)
NADH-ubiquinone oxidoreductase chain F n=1 Tax=Rhodovulum sp. PH10 RepID=J6UC29_9RHOB
NADH-ubiquinone oxidoreductase chain F {ECO:0000313|EMBL:EJW10821.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
A1-18-all-fractions_k255_2183794_66
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63345..63815
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZCP4_ROSLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI94468.1}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC; 15278 / OCh 149).;"
A1-18-all-fractions_k255_2183794_67
unknown

Not on your lists

63834..63944
DNA (111bp) protein (37aa)

This feature has no annotations

A1-18-all-fractions_k255_2183794_68
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63946..66024
DNA (2079bp) protein (693aa)
NADH-ubiquinone oxidoreductase chain G n=1 Tax=Rhodovulum sp. PH10 RepID=J6LC12_9RHOB
NADH-ubiquinone oxidoreductase chain G {ECO:0000313|EMBL:EJW10823.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
NADH dehydrogenase subunit G
A1-18-all-fractions_k255_2183794_69
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66030..67055
DNA (1026bp) protein (342aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
NADH-quinone oxidoreductase subunit H n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VGK9_RHOPX
respiratory-chain NADH dehydrogenase subunit 1
A1-18-all-fractions_k255_2183794_70
unknown

Not on your lists

67068..67307
DNA (240bp) protein (80aa)

This feature has no annotations

A1-18-all-fractions_k255_2183794_71
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67351..67839
DNA (489bp) protein (163aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
NADH-quinone oxidoreductase subunit I n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IXZ9_POLGS
nuoI1; NADH-quinone oxidoreductase subunit I
A1-18-all-fractions_k255_2183794_72
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67849..68463
DNA (615bp) protein (205aa)
nuoJ; NADH-quinone oxidoreductase subunit J (EC:1.6.99.5)
J subunit of NADH dehydrogenase i n=2 Tax=Oligotropha carboxidovorans RepID=B6JH38_OLICO
NADH:ubiquinone oxidoreductase subunit J {ECO:0000313|EMBL:ETR75322.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
A1-18-all-fractions_k255_2183794_73
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68484..68792
DNA (309bp) protein (103aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
NADH dehydrogenase subunit K (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit K n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIK7_9BRAD
A1-18-all-fractions_k255_2183794_74
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68800..70896
DNA (2097bp) protein (699aa)
Proton-translocating NADH-quinone oxidoreductase, chain L {ECO:0000313|EMBL:ABE40102.1}; EC=1.6.99.5 {ECO:0000313|EMBL:ABE40102.1};; Flags: Precursor;; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
NADH dehydrogenase subunit L (EC:1.6.99.5)
Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q135Y7_RHOPS
A1-18-all-fractions_k255_2183794_75
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70899..72407
DNA (1509bp) protein (503aa)
NADH dehydrogenase I chain M n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D7Y1_BRAJP
NADH-quinone oxidoreductase chain 13
NADH-quinone oxidoreductase chain M {ECO:0000313|EMBL:AHY50133.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
A1-18-all-fractions_k255_2183794_76
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72427..73878
DNA (1452bp) protein (484aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
NADH dehydrogenase subunit N (EC:1.6.5.3)
NADH:ubiquinone oxidoreductase subunit N n=1 Tax=Afipia birgiae RepID=UPI00030A0C32
A1-18-all-fractions_k255_2183794_77
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73896..74666
DNA (771bp) protein (257aa)
Biotin-protein ligase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UE65_9RHOB
Biotin-protein ligase {ECO:0000313|EMBL:EJW11841.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
biotin--acetyl-CoA-carboxylase ligase
A1-18-all-fractions_k255_2183794_78
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74679..76349
DNA (1671bp) protein (557aa)
Metallo-beta-lactamase family protein, RNA-specific n=1 Tax=Rhodovulum sp. PH10 RepID=J5PMV7_9RHOB
Metallo-beta-lactamase family protein, RNA-specific {ECO:0000313|EMBL:EJW11842.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
beta-lactamase-like
A1-18-all-fractions_k255_2183794_79
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76597..77001
DNA (405bp) protein (135aa)
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:ABS69837.1}; EC=5.1.99.1 {ECO:0000313|EMBL:ABS69837.1};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Methylmalonyl-CoA epimerase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IP91_XANP2
methylmalonyl-CoA epimerase
A1-18-all-fractions_k255_2183794_80
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77134..77403
DNA (270bp) protein (90aa)
Putative secreted protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YM36_9BRAD
Putative secreted protein {ECO:0000313|EMBL:EHR03685.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hypothetical protein
A1-18-all-fractions_k255_2183794_81
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77551..77757
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UD17_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW11296.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
A1-18-all-fractions_k255_2183794_82
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


78299..79618
DNA (1320bp) protein (440aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_01570}; EC=6.1.1.15 {ECO:0000255|HAMAP-Rule:MF_01570};; Prolyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_01570}; Short=ProRS {ECO:0000255|HAMAP-Rule:MF_01570};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Proline--tRNA ligase n=2 Tax=Oligotropha carboxidovorans RepID=SYP_OLICO
A1-18-all-fractions_k255_2183794_83
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79747..81015
DNA (1269bp) protein (423aa)
LolC/E family lipoprotein releasing system, transmembrane protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PFH9_9BRAD
LolC/E family lipoprotein releasing system, transmembrane protein {ECO:0000313|EMBL:EKS40291.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
lolC; lipoprotein releasing system transmembrane protein LolC
A1-18-all-fractions_k255_2183794_84
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81008..81745
DNA (738bp) protein (246aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
Lipoprotein releasing system ATP-binding protein LolD n=1 Tax=Rhodovulum sp. PH10 RepID=J5PMW4_9RHOB
lolD; outer membrane-specific lipoprotein ABC transporter ATP-binding protein
A1-18-all-fractions_k255_2183794_85
unknown

Not on your lists

81970..82068
DNA (99bp) protein (33aa)

This feature has no annotations

A1-18-all-fractions_k255_2183794_86
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82232..85678
DNA (3447bp) protein (1149aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
DNA polymerase III, alpha subunit n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PII6_9BRAD
DNA polymerase III subunit alpha
A1-18-all-fractions_k255_2183794_87
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


85846..86838
DNA (993bp) protein (331aa)
30S ribosomal protein S2 n=1 Tax=Rhodovulum sp. PH10 RepID=J6J9N9_9RHOB
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
rpsB; 30S ribosomal protein S2
A1-18-all-fractions_k255_2183794_88
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86937..87860
DNA (924bp) protein (308aa)
Elongation factor Ts n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=EFTS_BRASO
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
tsf; elongation factor Ts
A1-18-all-fractions_k255_2183794_89
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87921..88637
DNA (717bp) protein (239aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
pyrH; uridylate kinase PyrH (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PQA0_9RHOB
A1-18-all-fractions_k255_2183794_90
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88687..89250
DNA (564bp) protein (188aa)
Ribosome-recycling factor n=2 Tax=Rhodopseudomonas palustris RepID=RRF_RHOPA
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
frr; ribosome recycling factor
Displaying items 61-90 of 103 in total

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