ggKbase home page

A1-18-all-fractions_k255_3232778

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_3232778_1
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1017)
DNA (1017bp) protein (339aa)
C4-dicarboxylate ABC transporter n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037D9D52
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KGT79041.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
C4-dicarboxylate ABC transporter
A1-18-all-fractions_k255_3232778_2
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1014..1598)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZB82_9BRAD
conserved membrane hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM91103.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
A1-18-all-fractions_k255_3232778_3
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1669..2673)
DNA (1005bp) protein (335aa)
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2W7D6_9BRAD
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC54253.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
A1-18-all-fractions_k255_3232778_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2760..3581)
DNA (822bp) protein (274aa)
Enoyl-CoA hydratase (EC:4.2.1.17)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9XF82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13895.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
A1-18-all-fractions_k255_3232778_5
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3919..4503
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036BEA6F
putative cytochrome P460
Putative cytochrome P460 {ECO:0000313|EMBL:ACK52471.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
A1-18-all-fractions_k255_3232778_6
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4574..5071
DNA (498bp) protein (166aa)
Leucine-responsive regulatory protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRA9_RHOCS
lrp; leucine-responsive regulatory protein
Leucine-responsive regulatory protein {ECO:0000313|EMBL:ACI97995.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
A1-18-all-fractions_k255_3232778_7
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5551..6774
DNA (1224bp) protein (408aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
ornithine-oxoacid aminotransferase n=1 Tax=Methylocystis rosea RepID=UPI00037DA391
Ornithine aminotransferase
A1-18-all-fractions_k255_3232778_8
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6793..7692
DNA (900bp) protein (300aa)
Amidinotransferase, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRA8_RHOCS
Amidinotransferase {ECO:0000313|EMBL:ETR78672.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
amidinotransferase
A1-18-all-fractions_k255_3232778_9
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7838..9169
DNA (1332bp) protein (444aa)
ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000360EDF1
Phosphonate transport system ATP-binding protein {ECO:0000313|EMBL:ERF79749.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
ABC transporter substrate-binding protein
A1-18-all-fractions_k255_3232778_10
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9213..10148
DNA (936bp) protein (312aa)
Putative permease protein of sugar ABC transporter n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SHA4_9BRAD
putative permease protein of sugar ABC transporter
Putative permease protein of sugar ABC transporter {ECO:0000313|EMBL:CCD93581.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
A1-18-all-fractions_k255_3232778_11
bacterium YEK0313, Bacteria

Not on your lists

10145..11059
DNA (915bp) protein (305aa)
ABC transporter permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI000380E66E
Inner membrane ABC transporter permease protein YcjP {ECO:0000313|EMBL:CEJ15205.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
binding-protein dependent transport system inner membrane protein
A1-18-all-fractions_k255_3232778_12
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11071..12171
DNA (1101bp) protein (367aa)
sn-glycerol 3-phosphate transport protein (ABC superfamily, atp_bind) n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S330_9BRAD
sn-glycerol 3-phosphate transport protein (ABC superfamily, atp_bind) {ECO:0000313|EMBL:CCD88607.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
ugpC; sn-glycerol 3-phosphate ABC transporter ATP-binding protein
A1-18-all-fractions_k255_3232778_13
unknown

Not on your lists

comp(12255..12605)
DNA (351bp) protein (117aa)

This feature has no annotations

A1-18-all-fractions_k255_3232778_14
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12852..13262
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PM10_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHE52532.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
A1-18-all-fractions_k255_3232778_15
bacterium YEK0313, Bacteria

Not on your lists

comp(13554..14144)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0002F798B9
Proline/betaine transporter {ECO:0000313|EMBL:CEJ12455.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
general substrate transporter
A1-18-all-fractions_k255_3232778_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14160..14558
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VK81_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU44451.1}; Flags: Precursor;; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
A1-18-all-fractions_k255_3232778_17
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14647..16095)
DNA (1449bp) protein (483aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003150FC0
Bradyrhizobium elkanii strain UASWS1015 Contig182, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46463.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
A1-18-all-fractions_k255_3232778_18
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16140..17714)
DNA (1575bp) protein (525aa)
amine oxidase n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI00037C5856
Monoamine oxidase {ECO:0000313|EMBL:EJL27807.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
amine oxidase
A1-18-all-fractions_k255_3232778_19
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18035..19369
DNA (1335bp) protein (445aa)
C4-dicarboxylate transporter DctA n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G3M5_9BRAD
dctA; C4-dicarboxylate transporter DctA
C4-dicarboxylate transporter DctA {ECO:0000313|EMBL:BAL75362.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
A1-18-all-fractions_k255_3232778_20
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19433..20083)
DNA (651bp) protein (217aa)
Molybdate ABC transporter periplasmic molybdate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IC50_9BRAD
Molybdate ABC transporter periplasmic molybdate-binding protein {ECO:0000313|EMBL:ERF81150.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
A1-18-all-fractions_k255_3232778_21
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20329..21117)
DNA (789bp) protein (263aa)
phaB2; poly(3-hydroxyalkanoate) depolymerase PhaB (EC:3.1.1.-)
Poly(3-hydroxyalkanoate) depolymerase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HAR1_9BRAD
Poly(3-hydroxyalkanoate) depolymerase {ECO:0000313|EMBL:ERF81551.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
A1-18-all-fractions_k255_3232778_22
bacterium YEK0313, Bacteria

Not on your lists

comp(21118..22818)
DNA (1701bp) protein (567aa)
Putative polyhydroxyalkanoate synthase n=2 Tax=Bacteria RepID=U2ZI03_PSEAC
Poly-beta-hydroxybutyrate polymerase {ECO:0000313|EMBL:CEJ14553.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
poly(R)-hydroxyalkanoic acid synthase, class II
A1-18-all-fractions_k255_3232778_23
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22829..23329)
DNA (501bp) protein (167aa)
Acyl dehydratase MaoC n=2 Tax=Burkholderia RepID=I5D385_9BURK
MaoC domain protein dehydratase {ECO:0000313|EMBL:EUC11673.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
MaoC-like dehydratase
A1-18-all-fractions_k255_3232778_24
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23339..24979)
DNA (1641bp) protein (547aa)
AMP-dependent synthetase and ligase n=1 Tax=Burkholderia terrae BS001 RepID=I5D0P4_9BURK
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EIN01713.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
AMP-dependent synthetase and ligase
A1-18-all-fractions_k255_3232778_25
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25015..26796)
DNA (1782bp) protein (594aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IGR7_METNO
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KFG69788.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
acyl-CoA dehydrogenase domain-containing protein
A1-18-all-fractions_k255_3232778_26
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27011..27577
DNA (567bp) protein (189aa)
Transcriptional regulator, MerR family n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RMG7_9PROT
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EFH11498.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
MerR family transcriptional regulator
A1-18-all-fractions_k255_3232778_27
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27784..28011
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PRK6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS40988.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
A1-18-all-fractions_k255_3232778_28
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

28289..29176
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TLG6_9BRAD
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
A1-18-all-fractions_k255_3232778_29
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29256..30140)
DNA (885bp) protein (295aa)
NAD-dependent epimerase/dehydratase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TV97_9PROT
NAD-dependent dehydratase {ECO:0000313|EMBL:EWY42526.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
NAD-dependent epimerase/dehydratase family protein
A1-18-all-fractions_k255_3232778_30
Legionella massiliensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30526..31410
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Legionella shakespearei RepID=UPI000380DBC5
Carotene biosynthesis associated membrane protein {ECO:0000313|EMBL:CDZ77349.1}; Uncharacterized protein {ECO:0000313|EMBL:CEE13087.1}; TaxID=1034943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella massiliensis.;"
hypothetical protein
Displaying items 1-30 of 88 in total

View Taxonomy