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A2-16-all-fractions_k255_954181_9

Organism: A2-16-all-fractions_metab_conc_14

partial RP 21 / 55 MC: 3 BSCG 22 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(5791..6504)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LuxR family n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IU59_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 236.0
  • Bit_score: 234
  • Evalue 7.30e-59
transcriptional regulator RhlR similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 236.0
  • Bit_score: 240
  • Evalue 3.70e-61
Transcriptional regulator RhlR {ECO:0000313|EMBL:AIY41826.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 236.0
  • Bit_score: 240
  • Evalue 1.90e-60

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Taxonomy

Collimonas arenae → Collimonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
GTGGACGACTGGCGAGTGAACCTTCTGGAGGGCATGAGCGCCCAACCCACGGCACAGGCCTGCTTCGAGCGAATCGCCGAGGAGGCCTCGAAGATCGGCTTCGAATACTGCACGCACGGCACGCGCCTGCCCGTGCCGATCACCCGGCCCCGCACGACCATGCACAGCAACTATCCGCAGGCATGGCTCCAGCGCTATCACGAGCAAGGCTACATGGAGGTCGACCCGACGGTCGCCCATGGCATGCGCTCGTCGGCGCCCATCATCTGGAGCGACGCGTTCTTCGCGAGCTCGCCGCAGTTGTGGGAAGAAGCCAAGAGCCATGGCCTGCGCCACGGCTGGGCGCAGTCGCGTCGCGATCCCGAAGGCAGCTACAGCCTGCTGGTGCTGGCGCGCTCCGAAGGGGCGCTGTCCGAACGCACCCTGCAGGAGCTCACGCCGCGCATGCAGTGGCTGGTCAACGCCAGCCACGAGGCGATGAAGGCCAGCGTGCAGGAAAAGAGCCAGGAGCAGGCGCCCGCTGAATTGTCCGACCGCGAGATCGACGTGCTGCGCTGGACGGCGGAGGGCAAGACCTCGGCCGAGGTGGCGGACATCCTCAACATCTCGGAGCGCACCGTCAACTTCCACATCAACACGGTGGTCGCCAAGCTCGGTGCGTGCAACAAGACCAGCGCGGCCGTCCGTGCGGCCATGTTCGGCCTGCTCTGGTGA
PROTEIN sequence
Length: 238
VDDWRVNLLEGMSAQPTAQACFERIAEEASKIGFEYCTHGTRLPVPITRPRTTMHSNYPQAWLQRYHEQGYMEVDPTVAHGMRSSAPIIWSDAFFASSPQLWEEAKSHGLRHGWAQSRRDPEGSYSLLVLARSEGALSERTLQELTPRMQWLVNASHEAMKASVQEKSQEQAPAELSDREIDVLRWTAEGKTSAEVADILNISERTVNFHINTVVAKLGACNKTSAAVRAAMFGLLW*