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A2-16-all-fractions_k255_994635_4

Organism: A2-16-all-fractions_metab_conc_14

partial RP 21 / 55 MC: 3 BSCG 22 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(1465..3225)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 583.0
  • Bit_score: 991
  • Evalue 2.70e-286
Transcription-repair-coupling factor n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSP4_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 583.0
  • Bit_score: 991
  • Evalue 1.90e-286
mfd; transcription-repair-coupling factor similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 583.0
  • Bit_score: 991
  • Evalue 5.40e-287

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Taxonomy

Rubrivivax gelatinosus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1761
GCCGAACTGCTGAACCTCTATGCGCGCCGCGCCGCGCGCGACGGCTACTCGCACCGTTTCTCGCCGCACGACTACGAGGCCTTCGCGACCAGCTTCGGCTTCGAGGAGACGCCCGACCAGCGCGCCGCGATCCACGCGGTGATCCAGGACCTGGTCAGCCCCAAGCCGATGGACCGCCTGGTCTGCGGCGACGTCGGCTTCGGCAAGACCGAGGTGGCGTTGCGCGCGGCCTTCGTGGCCGTGCACGGCGGCAAGCAGGTCGCGCTGCTGGCGCCGACCACGCTGCTGGCCGAGCAGCACTTCCAGACCATCAGCAACCGCTTCGGCCAGTGGCCGGTGAAGGTGGCGGAGATGTCGCGCTTTCGCACCGCCAAGGAGGTCTCGGCCGCGATGAAGGGCCTGGAGGACGGCACCATCGACATCGTCGTGGGCACGCACAAGCTGCTGTCGGGCGATGTCAAGTTCAAGCGGCTGGGCCTGCTGATCGTCGACGAGGAACACCGCTTCGGCGTGCGCCACAAGGAGGCGATGAAGGCGCTGCGCGCCGAGGTCGACGTGCTCACGCTGACCGCCACGCCGATCCCGCGCACGCTGGGCATGGCGCTGGAGGGCTTGCGCGACCTGTCGGTGATCGCCACCGCGCCGCAGCGCCGCCTGGCCATCAAGACCTTCGTGCGCAGCGAGACGCAGGGCACGATCCGCGAGGCCATCCTGCGCGAACTCAAGCGCGGCGGCCAGTGCTACTTCCTGCACAACGAGGTCGAGACGATCCAGAACCGGCTCGAGAAGCTCACCCAGCTGATCCCCGAGGCGCGCATCGCGATCGCGCATGGCCAGATGCCCGAGCGCGAGCTGGAATCGGTGATGCGCGACTTCGTGGCGCAGCGCATCAACGTGCTGCTGTGCTCGACCATCATCGAGACGGGCATCGACGTGCCCACCGCCAACACCATCGTCATCAGCCGCGCCGACAAGTTCGGCCTGGCGCAGCTGCACCAGTTGCGCGGACGCGTCGGCCGTTCGCACCACCAGGCCTATGCCTACCTGATGGTGCCCGACGTCGAGGGCCTGACCAAGCAGGCCGCGCAGCGCCTGGACGCGATCCAGGCGATGGAGGAACTCGGCTCGGGCTTCTATCTGGCAATGCACGACCTGGAGATCCGCGGCGCCGGCGAGGTGCTGGGCGAGAACCAGAGCGGCAACATGATGGAAGTCGGCTTCCAGCTGTACAACGACATGCTGGCCGAGGCCGTGCGGGCGCTGAAGTCCGGCAGGGAACCCGACCTGCTCTCGCCCACCGGCGCCTTCGGCGGCGGCATCGACATCAAGCTGCACGCCCCTGCCCTGCTGCCCGACGCCTACTGCGGCGACGTGCAGACGCGCCTGTCGCTGTACAAGCGCCTGGCCACCGCCGACCGCCCCGAGACCCTGGACAACCTGCTCGAGGAGATCACCGACCGCTTCGGCAAGCTGCCGCCACAGGGCCAGACGCTGTTCGACACGCACCGCCTGCGCGTGCTGGCCAAGAGCTACGGCGTGCTCAAGGTGGACGCCAACCCCAAGGTGATGAACATCACCTTCCGGCCCAATCCGCCGGTCGACCCGATGCGCATCATCGAGCTCGTGCAGAAGAACCGCAGCGTCAAGCTCGCGGGCAACGACCGGCTGCGCATCGACCGCGAGATCGCCGAGCCGCACGAGCGTGCGCAGTACGTGCGCGACCTGCTGCGCTCGCTGGGAGCGCCCAAGGCAGGCGACTAG
PROTEIN sequence
Length: 587
AELLNLYARRAARDGYSHRFSPHDYEAFATSFGFEETPDQRAAIHAVIQDLVSPKPMDRLVCGDVGFGKTEVALRAAFVAVHGGKQVALLAPTTLLAEQHFQTISNRFGQWPVKVAEMSRFRTAKEVSAAMKGLEDGTIDIVVGTHKLLSGDVKFKRLGLLIVDEEHRFGVRHKEAMKALRAEVDVLTLTATPIPRTLGMALEGLRDLSVIATAPQRRLAIKTFVRSETQGTIREAILRELKRGGQCYFLHNEVETIQNRLEKLTQLIPEARIAIAHGQMPERELESVMRDFVAQRINVLLCSTIIETGIDVPTANTIVISRADKFGLAQLHQLRGRVGRSHHQAYAYLMVPDVEGLTKQAAQRLDAIQAMEELGSGFYLAMHDLEIRGAGEVLGENQSGNMMEVGFQLYNDMLAEAVRALKSGREPDLLSPTGAFGGGIDIKLHAPALLPDAYCGDVQTRLSLYKRLATADRPETLDNLLEEITDRFGKLPPQGQTLFDTHRLRVLAKSYGVLKVDANPKVMNITFRPNPPVDPMRIIELVQKNRSVKLAGNDRLRIDREIAEPHERAQYVRDLLRSLGAPKAGD*