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A2-16-all-fractions_k255_3429148_3

Organism: A2-16-all-fractions_metab_conc_14

partial RP 21 / 55 MC: 3 BSCG 22 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 1999..2682

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 197.0
  • Bit_score: 295
  • Evalue 6.10e-77
23S rRNA methyltransferase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034C13A8 similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 199.0
  • Bit_score: 302
  • Evalue 3.60e-79
rumA; 23S rRNA 5-methyluridine methyltransferase similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 197.0
  • Bit_score: 295
  • Evalue 1.20e-77

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGAGTACAGAGCAACAGGGCGGCGGCAAGGGCCGCGGCCGTCATCGCAGGGACCGCAACGCAGGCCCGGCACCGGGCGTTTCCGACAACGAGTGGCTCAAGGTCACCGGCATCGACCTCGACGCGCAGGGCATCGCGCACAACAGCGAAGGCATCGTCGTGTTCATCGACGGCGCGCTGCCGGGCGAGGAGGCGCGCGTCAAGGTCATCAAGCGCAAGAAGCAGTGGGAGAAGGCCGACCTGGTGGCGATCCGCCGCGAGAGCTCGCAGCGCGTCACGCCACGCTGTCCGCACTTCGGCTTGCATGCCGGCGCATGCGGCGGCTGCAAGATGCAGCACCTGGCGCCCTCGGCCCAGGTGGCGATGAAGCAGCGCGTGCTGGAGAACAATCTCTGGCACCTGGGCAAGGTGCGGCCCGAGATGGTGCTGCGGCCGATCGAGGGCCCGCCCTGGGGCTACCGGTTGCGGGCGCGGCTGTCGGTGCGCTGGGTGGCCAAGAAGAACACGGTGCTGGTCGGCTTTCACGAGCGCAAATCCAGCTACGTGGCCGACATGCGCGAATGCCACGTGATGCCCAGGCGCATCTCGGACATGCTGCTGCCGCTGCGCGCGCTGATCGAGGCGATGCAGGCGCGCGAGCGGCTGCCGCAGATCGAGGTCGCCATCGGCGACCAGGTGACCGCG
PROTEIN sequence
Length: 228
MSTEQQGGGKGRGRHRRDRNAGPAPGVSDNEWLKVTGIDLDAQGIAHNSEGIVVFIDGALPGEEARVKVIKRKKQWEKADLVAIRRESSQRVTPRCPHFGLHAGACGGCKMQHLAPSAQVAMKQRVLENNLWHLGKVRPEMVLRPIEGPPWGYRLRARLSVRWVAKKNTVLVGFHERKSSYVADMRECHVMPRRISDMLLPLRALIEAMQARERLPQIEVAIGDQVTA