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A2-16-all-fractions_k255_5501626_3

Organism: A2-16-all-fractions_metab_conc_7

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 13 / 38 MC: 4
Location: comp(2156..2734)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRU3_ACIC1 similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 193.0
  • Bit_score: 186
  • Evalue 1.80e-44
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 193.0
  • Bit_score: 186
  • Evalue 5.20e-45
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABK52153.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 193.0
  • Bit_score: 186
  • Evalue 2.60e-44

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Taxonomy

Acidothermus cellulolyticus → Acidothermus → Acidothermales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 579
GTGATCGGTGCTGCGTTCCGGGACACCCTGGCCGACGCCAAGGCCGGCGATGAGGCAGCCTTCACTCGCCTGTTCCGTGACGTGCAGCCGGCCCTGCTCCGTTACCTGCGGCTGATCGCGCCCGATGCCGATGACGTGGCCGGCGACACCTGGCTGCAGGTGGTGGGCGGCCTGGAGCGCTTCCGCGGTGAGGAGCAGGACTTCCGGGCCTGGCTGTTCACCATCGCCCGGCACCGGGCGGTGGATTCCGGGCGGTCGCGGGCCCGCCGCCCCGCCATCCCCCTCGAGATGACCGAAGCGGAGCAGCAGCCGACTATCTCCGATGCCGCCGATCAGGCGCTGGAGGCGGTTTCCACGCGGGCGGTGCTGGAGCTGATCGCGTCGCTGCCGGGCGACCAGGCCGAGATCATCCTGCTGCGGGTGGTGGCCGGCCTCGAGGCCCGTGAGGTGGCCCGGATCGTGGGCAAGTCCCCGGGGGCCGTCCGGGTGGCGGCGCACCGCGGCCTGCGCAAGCTGGCCGGCCTGACCGCGCTGCCCGACGCCGAACGAGCAGGTACGAGGCCAGGTGTAACACATTGA
PROTEIN sequence
Length: 193
VIGAAFRDTLADAKAGDEAAFTRLFRDVQPALLRYLRLIAPDADDVAGDTWLQVVGGLERFRGEEQDFRAWLFTIARHRAVDSGRSRARRPAIPLEMTEAEQQPTISDAADQALEAVSTRAVLELIASLPGDQAEIILLRVVAGLEAREVARIVGKSPGAVRVAAHRGLRKLAGLTALPDAERAGTRPGVTH*