ggKbase home page

A2-16-all-fractions_k255_5800050_3

Organism: A2-16-all-fractions_metab_conc_7

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 13 / 38 MC: 4
Location: comp(1255..2361)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI000367D4D0 similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 343.0
  • Bit_score: 566
  • Evalue 1.30e-158
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 324.0
  • Bit_score: 562
  • Evalue 5.10e-158
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 324.0
  • Bit_score: 562
  • Evalue 2.50e-157

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermobifida fusca → Thermobifida → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
CTCGGCGAGTACCTTGCCGGGCAATGCGCCGTGAGATATGACGCCCGCGCTGGCCGTACCCGGTTCGGGGCCTGGCTCATGGCACACGCGGCAGGAGGAGCCGTCGCGGAAGCCGGCGAAGTAAGGGCTGCCCCGTGGGAGGTCTTCGTCCTGGGTGATGACGACGAGGACCTGGCCGCCCAGGCGCAGGCGGCGGGCGCCACCGCCGACCCGGTCAAGGACTACCTGAAGCAGATCGGCAAGATCCCGCCGCTGGACGCCAGGCAGGAGGTCGAGCTGGCCAAGCGGATCGAGGCCGGCCTGTCCGCCGAGGAGAAGCTCGCTGACGGCAACCGGCTGAATGATGGCCAGCGGCTGCGCCTGGAGTGGATCGCCGAGGACGGGCGACGCGCCAAGGACCACCTGCTGGAGGCGAACCTGCGGCTGGTCGTGTCGCTGGCCAAGCGGTATACCGGGCGGGGGATGCTGTTCCTGGACCTGATCCAGGAGGGGAACCTGGGGCTGATCCGGGCGGTGGAGAAGTTCGATTACACCAAGGGCTACAAGTTCTCGACGTATGCGACGTGGTGGATCCGGCAGGCGATCACGCGGGCGATGGCGGATCAGGCGCGGACGATCCGGATCCCGGTGCACATGGTCGAGGTGATCAACAAGCTGGCCCGGGTGCAGCGGCAGATGCTGCAGGACCTGGGGCGGGAGCCGACTCCGGATGAGCTGGCGGTGGAGCTGGACATGACCCCGGAGAAGGTCATCGAGGTGCAGAAGTACGGCCGGGAGCCGATCTCGCTGCATACCCCGCTGGGCGAGGACGGCGACAGCGAGTTCGGTGACCTGATCGAGGATTCGGAGGCGATCCAGCCGGGGGAGGCGGTCAGCTTCACGTTGCTGCAGGAGCAGCTGCACTCGGTGCTGGACACGCTGTCGGAGCGGGAGGCGGGCGTGGTCTCGATGCGGTTCGGGCTGACCGACGGCCAGCCCAAGACGCTGGATGAGATCGGCAAGGTGTACGGCGTGACCCGGGAGCGGATCCGCCAGATCGAGTCCAAGACCATGTCCAAGCTCCGGCACACGTCCCGGTCCGACCTCCTGCGCGACTACCTGGACTGA
PROTEIN sequence
Length: 369
LGEYLAGQCAVRYDARAGRTRFGAWLMAHAAGGAVAEAGEVRAAPWEVFVLGDDDEDLAAQAQAAGATADPVKDYLKQIGKIPPLDARQEVELAKRIEAGLSAEEKLADGNRLNDGQRLRLEWIAEDGRRAKDHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPDELAVELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAIQPGEAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHTSRSDLLRDYLD*