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A2-16-all-fractions_metab_conc_7

wsip-metawrap-drep-bins_Actinobacteria_71_4
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 4.44 Longest contig: 23.78 Kbp Bin length: 6.56 Mbp GC content: 71.49 %
Contigs count: 1333 Features count: 7228 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 13 / 38 MC: 4
Displaying items 1251-1300 of 1333 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
A2-16-all-fractions_k255_612214
Species: Nocardiopsis dassonvillei (50%)
2 2101 bp 75.39 5.07 87.67
A2-16-all-fractions_k255_4344393
Species: Thermomonospora curvata (50%)
2 2149 bp 73.20 4.19 82.22
A2-16-all-fractions_k255_3127480
Species: RLO_RIF_CHLX_71_12 (50%)
2 3663 bp 74.42 4.18 99.67
A2-16-all-fractions_k255_4386508
Species: Leifsonia aquatica (50%)
2 3062 bp 71.39 4.07 90.24
A2-16-all-fractions_k255_683752
Species: Thermomonospora curvata (50%)
2 4248 bp 73.42 5.93 98.73
A2-16-all-fractions_k255_2055035
Species: Saccharomonospora marina (50%)
2 2112 bp 71.59 4.90 92.33
A2-16-all-fractions_k255_4401615
Species: Thermobispora bispora (50%)
2 3901 bp 68.42 3.96 39.37
A2-16-all-fractions_k255_5575159
Species: Tetrasphaera japonica (50%)
2 3006 bp 72.62 4.09 88.72
A2-16-all-fractions_k255_3185157
Species: Actinoplanes sp. SE50/110 (50%)
2 2650 bp 71.89 4.02 96.23
A2-16-all-fractions_k255_5582257
Species: Pseudonocardia dioxanivorans (50%)
2 2209 bp 71.03 8.83 99.00
A2-16-all-fractions_k255_751521
Species: Thermobispora bispora (50%)
2 3466 bp 69.56 3.51 62.49
A2-16-all-fractions_k255_2108608
Species: Microbispora sp. ATCC PTA-5024 (50%)
2 2567 bp 71.99 4.85 88.59
A2-16-all-fractions_k255_2157244
Species: Thermomonospora curvata (100%)
2 3642 bp 70.40 3.75 88.30
A2-16-all-fractions_k255_3258015
Species: Rhodococcus jostii (50%)
2 3150 bp 71.43 5.24 70.48
A2-16-all-fractions_k255_776944
Species: Acidothermus cellulolyticus (50%)
2 2385 bp 69.85 4.03 81.01
A2-16-all-fractions_k255_789396
Species: Micromonospora aurantiaca (50%)
2 2081 bp 72.90 2.38 93.99
A2-16-all-fractions_k255_4523475
Species: Thermomonospora curvata (50%)
2 2644 bp 71.18 4.31 100.19
A2-16-all-fractions_k255_4555172
Species: Pseudonocardia dioxanivorans (100%)
2 2849 bp 73.36 5.37 100.04
A2-16-all-fractions_k255_822283
Species: Kitasatospora cheerisanensis (50%)
2 3523 bp 73.97 3.45 95.12
A2-16-all-fractions_k255_5667852
Species: Frankia alni (50%)
2 2931 bp 74.31 2.41 96.52
A2-16-all-fractions_k255_829034
Species: Modestobacter multiseptatus (50%)
2 2256 bp 74.34 5.72 98.94
A2-16-all-fractions_k255_2216875
Species: Geodermatophilus obscurus (50%)
2 3185 bp 71.08 5.18 59.53
A2-16-all-fractions_k255_868704
Species: Cellulomonas carbonis (50%)
2 2918 bp 71.14 8.33 95.51
A2-16-all-fractions_k255_3372579
Species: Streptomyces roseochromogenus (50%)
2 2445 bp 73.50 4.72 100.12
A2-16-all-fractions_k255_5729364
Species: Frankia sp. EuI1c (50%)
2 2582 bp 69.48 6.27 97.48
A2-16-all-fractions_k255_2293330
Species: Geodermatophilus obscurus (100%)
2 2462 bp 71.57 6.40 99.43
A2-16-all-fractions_k255_990277
Species: Streptomyces himastatinicus (50%)
2 2384 bp 67.03 3.65 89.60
A2-16-all-fractions_k255_4704848
Species: Thermomonospora curvata (50%)
2 2467 bp 67.09 14.23 98.74
A2-16-all-fractions_k255_4705416
Species: Acidothermus cellulolyticus (50%)
2 2366 bp 72.23 5.14 96.87
A2-16-all-fractions_k255_5827777
Species: Microlunatus phosphovorus (50%)
2 3087 bp 76.81 1.90 97.28
A2-16-all-fractions_k255_3479736
Species: Nitrosococcus watsonii (50%)
2 2479 bp 69.38 3.03 88.58
A2-16-all-fractions_k255_2375548
Species: Frankia sp. QA3 (50%)
2 2357 bp 71.79 7.64 86.93
A2-16-all-fractions_k255_5878463
Species: Streptomyces sp. HPH0547 (50%)
2 2286 bp 72.40 4.99 82.41
A2-16-all-fractions_k255_1069921
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 2869 bp 76.19 4.44 98.40
A2-16-all-fractions_k255_1077756
Species: Kribbella flavida (100%)
2 3094 bp 69.49 3.83 100.26
A2-16-all-fractions_k255_4842137
Species: Blastococcus saxobsidens (50%)
2 3887 bp 74.89 1.81 90.84
A2-16-all-fractions_k255_1086199
Species: Mycobacterium triplex (50%)
2 2328 bp 75.47 3.80 94.97
A2-16-all-fractions_k255_3567559
Species: Streptomyces griseoaurantiacus (50%)
2 2109 bp 74.68 3.98 87.91
A2-16-all-fractions_k255_1091051
Species: Catenulispora acidiphila (50%)
2 2076 bp 74.04 5.56 100.15
A2-16-all-fractions_k255_3581927
Species: Rhodococcus ruber (50%)
2 3856 bp 68.70 4.28 96.01
A2-16-all-fractions_k255_2453348
Species: Streptomyces auratus (100%)
2 2493 bp 71.88 4.69 100.12
A2-16-all-fractions_k255_2467333
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (50%)
2 2584 bp 71.75 8.18 100.08
A2-16-all-fractions_k255_2475877
Species: Nocardioides sp. JS614 (50%)
2 3524 bp 72.56 2.13 95.18
A2-16-all-fractions_k255_4896913
Species: RLO_Betaproteobacteria_65_14 (50%)
2 2088 bp 66.48 7.61 55.32
A2-16-all-fractions_k255_2485427
Species: Penicillium expansum (50%)
2 2514 bp 72.75 3.22 99.76
A2-16-all-fractions_k255_1227897
Species: Microbispora sp. ATCC PTA-5024 (50%)
2 2770 bp 70.11 3.47 90.87
A2-16-all-fractions_k255_3727507
Species: Frankia sp. EuI1c (50%)
2 2763 bp 69.13 4.40 73.18
A2-16-all-fractions_k255_3733055
Species: Mycobacterium yongonense (50%)
2 2522 bp 70.34 4.04 65.90
A2-16-all-fractions_k255_3762678
Species: Amycolatopsis orientalis (50%)
2 3293 bp 70.39 4.92 77.07
A2-16-all-fractions_k255_2576219
Species: Microbacterium sp. UCD-TDU (50%)
2 3184 bp 73.08 3.58 82.26
Displaying items 1251-1300 of 1333 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.