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A2-18-all-fractions_k255_4803420_26

Organism: A2-18-all-fractions_metab_conc_111

partial RP 15 / 55 MC: 1 BSCG 18 / 51 MC: 2 ASCG 10 / 38 MC: 3
Location: 22949..23593

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J9T6_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 217.0
  • Bit_score: 171
  • Evalue 5.20e-40
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 217.0
  • Bit_score: 171
  • Evalue 1.50e-40
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 205.0
  • Bit_score: 175
  • Evalue 6.60e-41

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGCTGCGGCCCATGAACAGCGCACCTATCTCAAAGACCTGTCCCACCGAAGACCTGCGCCTGGTGGAGGCGCTCCGCCGCGGCGACGAGGGAGCATTCGCGGAGCTGGTCGAGCGGTACGAGCGGATGATGCTCGGCGTCGCGTCGGGGTATGTCCGGACCCGCGCCGTGGCCCAGGAGGTCGTGCAGGACACGTGGCTCAGCGTGTTCAAAAGCATCCACTCCTTCGAGTGCCGTTCGAGCCTCAAGACCTGGATCTTCCGGATCCTCGTGAACCGCGCCAAGACGCGCGGCGCCGGCGAGAGCCGCTCCATCCCCTTCTCCGCGTTCCAGCCTGACGACTCCGACGCGTTCGATCCCGAATCGTTGATCGACCGCAGCCGCATCGGTGCGGCCGAGGCCGAGTCGCCCGAGCGAGTGCTGGTGTCCCGCGAGACGTTCGATTACGCGCTTCGCGCCATCGAGCAGCTGCCGGAGAACCAGCGCCGGGTGATCGCGATGCGCGATCTCCAGGGCTGCTCGTCGGACGAGGTGTGCTCCACGCTCGGGATCACGAGCGGCAACCAGCGCGTCCAGCTTCATCGCGCTCGCGCGGCCGTCGCCCGTGACCTCGCGCCCTACCTGGCCACGGCGACCCGAGGCTAG
PROTEIN sequence
Length: 215
MLRPMNSAPISKTCPTEDLRLVEALRRGDEGAFAELVERYERMMLGVASGYVRTRAVAQEVVQDTWLSVFKSIHSFECRSSLKTWIFRILVNRAKTRGAGESRSIPFSAFQPDDSDAFDPESLIDRSRIGAAEAESPERVLVSRETFDYALRAIEQLPENQRRVIAMRDLQGCSSDEVCSTLGITSGNQRVQLHRARAAVARDLAPYLATATRG*