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A2-18-all-fractions_metab_conc_122

wsip-metawrap-drep-bins_Actinobacteria_71_6
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 1301-1350 of 1413 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
A2-18-all-fractions_k255_6336701
Class: Actinobacteria (83.33%)
6 6268 bp 72.65 8.02 96.44
A2-18-all-fractions_k255_1359869
Class: Actinobacteria (75%)
4 3831 bp 72.80 8.03 88.10
A2-18-all-fractions_k255_6175785
Class: Actinobacteria (75%)
4 2857 bp 72.21 8.03 91.46
A2-18-all-fractions_k255_2626443
Species: Actinoplanes utahensis (50%)
4 2427 bp 71.20 8.03 94.56
A2-18-all-fractions_k255_1322902
Class: Actinobacteria (80%)
5 3045 bp 70.71 8.03 90.34
A2-18-all-fractions_k255_5520287
Order: Streptosporangiales (85.71%)
7 6595 bp 73.90 8.05 96.07
A2-18-all-fractions_k255_224588
Class: Actinobacteria (50%)
6 5183 bp 70.02 8.05 94.81
A2-18-all-fractions_k255_3198109
Order: Streptosporangiales (71.43%)
7 7344 bp 73.16 8.05 92.28
A2-18-all-fractions_k255_4139813
Species: Pseudonocardia dioxanivorans (60%)
5 5343 bp 72.26 8.06 96.29
A2-18-all-fractions_k255_3905538
Species: Streptomyces sp. PRh5 (50%)
2 2270 bp 66.39 8.06 87.09
A2-18-all-fractions_k255_1640333
Species: Thermobispora bispora (50%)
2 3140 bp 71.18 8.07 100.03
A2-18-all-fractions_k255_5953222
Species: Nakamurella multipartita (75%)
4 3933 bp 73.48 8.09 96.11
A2-18-all-fractions_k255_2830277
Species: Anaeromyxobacter sp. PSR-1 (50%)
2 4142 bp 73.76 8.11 95.90
A2-18-all-fractions_k255_3144102
Class: Actinobacteria (100%)
4 6298 bp 70.97 8.12 90.89
A2-18-all-fractions_k255_1123609
Genus: Streptomyces (50%)
4 2794 bp 75.45 8.16 96.64
A2-18-all-fractions_k255_3087443
Order: Streptosporangiales (60%)
5 4733 bp 72.72 8.21 77.84
A2-18-all-fractions_k255_1554226
Order: Streptosporangiales (66.67%)
3 3084 bp 70.04 8.22 86.48
A2-18-all-fractions_k255_3471910
Phylum: Actinobacteria (50%)
6 4214 bp 70.12 8.22 91.55
A2-18-all-fractions_k255_5346842
Order: Streptosporangiales (71.43%)
7 6365 bp 68.78 8.22 83.33
A2-18-all-fractions_k255_286552
Class: Actinobacteria (75%)
4 3955 bp 70.95 8.23 99.22
A2-18-all-fractions_k255_4266233
Class: Actinobacteria (62.5%)
8 7382 bp 69.11 8.29 77.87
A2-18-all-fractions_k255_4805968
Order: Streptosporangiales (75%)
12 11954 bp 70.79 8.29 81.29
A2-18-all-fractions_k255_819306
Order: Streptosporangiales (75%)
4 4949 bp 70.54 8.30 81.71
A2-18-all-fractions_k255_2308868
Class: Actinobacteria (66.67%)
3 2061 bp 73.07 8.30 93.89
A2-18-all-fractions_k255_5222639
Species: Thermomonospora curvata (100%)
2 2005 bp 69.38 8.30 96.51
A2-18-all-fractions_k255_6729204
Genus: Amycolatopsis (66.67%)
3 4177 bp 71.03 8.30 99.40
A2-18-all-fractions_k255_3072313
Class: Actinobacteria (100%)
10 7174 bp 72.30 8.32 95.85
A2-18-all-fractions_k255_6330373
Order: Streptosporangiales (80%)
5 3587 bp 74.07 8.32 100.53
A2-18-all-fractions_k255_7497147
Class: Actinobacteria (100%)
4 3116 bp 73.40 8.33 88.86
A2-18-all-fractions_k255_3163569
Order: Streptosporangiales (75%)
4 4661 bp 73.42 8.34 90.05
A2-18-all-fractions_k255_4548551
Class: Actinobacteria (80%)
10 8916 bp 66.62 8.34 82.94
A2-18-all-fractions_k255_2704991
Order: Streptosporangiales (55.56%)
9 8437 bp 72.37 8.39 91.24
A2-18-all-fractions_k255_2162231
Species: Streptomyces sp. HGB0020 (50%)
2 3661 bp 74.11 8.40 101.37
A2-18-all-fractions_k255_2452225
Order: Streptosporangiales (61.54%)
13 16110 bp 69.53 8.49 83.76
A2-18-all-fractions_k255_1006201
Species: Thermomonospora curvata (100%)
1 2662 bp 73.55 8.51 99.96
A2-18-all-fractions_k255_6390525
Species: CSP1_4_Chloroflexi (50%)
2 2412 bp 72.97 8.52 95.15
A2-18-all-fractions_k255_2946268
Class: Actinobacteria (75%)
4 3901 bp 68.73 8.57 85.44
A2-18-all-fractions_k255_3851147
Class: Actinobacteria (60%)
5 4894 bp 70.74 8.58 95.38
A2-18-all-fractions_k255_5105158
Genus: Streptomyces (50%)
4 6461 bp 71.23 8.61 96.58
A2-18-all-fractions_k255_2550565
Species: Geodermatophilus obscurus (100%)
2 2941 bp 71.13 8.67 99.56
A2-18-all-fractions_k255_5438487
Species: Thermobispora bispora (66.67%)
3 2838 bp 73.54 8.72 97.25
A2-18-all-fractions_k255_4983870
Species: Microbispora sp. ATCC PTA-5024 (50%)
4 4360 bp 69.91 8.77 84.01
A2-18-all-fractions_k255_5537941
Genus: Frankia (50%)
4 3035 bp 68.86 8.80 99.84
A2-18-all-fractions_k255_4958077
Class: Actinobacteria (100%)
5 5336 bp 71.23 8.80 97.55
A2-18-all-fractions_k255_5398802
Species: Pseudonocardia dioxanivorans (100%)
3 2108 bp 68.31 8.82 99.48
A2-18-all-fractions_k255_4958213
Class: Actinobacteria (100%)
5 3728 bp 70.39 8.85 82.00
A2-18-all-fractions_k255_4428740
Class: Actinobacteria (100%)
3 2640 bp 72.31 8.86 92.84
A2-18-all-fractions_k255_381541
Class: Actinobacteria (100%)
3 4004 bp 72.05 8.99 84.97
A2-18-all-fractions_k255_3507645
Species: Thermomonospora curvata (66.67%)
3 3550 bp 71.27 9.08 92.62
A2-18-all-fractions_k255_4874252
Class: Actinobacteria (75%)
4 3481 bp 69.41 9.09 91.78
Displaying items 1301-1350 of 1413 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.