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A3-16-all-fractions_k255_6839374_7

Organism: A3-16-all-fractions_metab_conc_15

partial RP 23 / 55 BSCG 22 / 51 MC: 2 ASCG 8 / 38 MC: 3
Location: comp(7798..9183)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 445.0
  • Bit_score: 793
  • Evalue 1.40e-226
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 445.0
  • Bit_score: 699
  • Evalue 3.40e-199
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037C36FE similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 445.0
  • Bit_score: 798
  • Evalue 3.20e-228

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Taxonomy

Massilia consociata → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1386
ATGCAAGAAACCTTCATCAACATCAAATCCCTCGACATGGACGCGCGCGGCGTCGGCCACCTGGAGAACGAGGATGGCACGCCAGGCAAAGTGATCTTTGTCGAAGGCGCGCTGCCGGGCGAGCGCGTCAGCTTCGAGACCCTGCGCAAGAAGAAGAACTGGGAATCGGGCCGCATGGTCACCCTGCAGAAGGCGTCGTCGATGCGCGTCGAGCCGAAGTGCCCGCACTTCTGGCATTGCGGCGGCTGCTCGATGCAGCATCTGGAGCCGTCGGCCCAGGTCGCGATGAAGCAGCGCGTGCTGGAAGACAACCTGTGGCATATCGGGAAGACGAAGGCCGAGAACATCATGCGCCCGATGTACGGCCCCACGTGGGACTACCGCTACCGCGCGCGCCTGTCGGTGCGCTACGTGGCCAGGAAGGGCACGGTGCTGGTCGGCTTCCACGAGCGCCATTCGTCGTACGTGGCCGACATGACGAGCTGCGAGATCCTGCCGGACCACATCTCGGCCATGCTCGTGCCGCTGCGCGAACTGGTGGGCGCGCTGTCGATCTACCAGCAGATGCCGCAGATCGAGGTCGCCGTCGGCGAGGACGTCACCGTGCTCGTGCTGCGCATCATGGCGCCGCTCGCGCCGGCCGACGAAAAGCTGGTCAAGGAATTCGCGGACAAGTGGAACATCCAGTGGTGGCTGCAGCCGAAAGGCCCGGACACGGCGGCACCGTACTATCCGCTGGATAAGGAACTGTATTACTCGCTGCCGGAATTCGGCATCAGAATGCCGTTCAAGCCGACCGATTTCACGCAGGTGAACCACCAGATCAACCGCCTGCTCGTGCACAAGGCGCTGGGCCTGCTGGAGGTGCAGCCGACGGACCGCGTGGCCGACCTGTTCTGCGGCCTCGGCAACTTCACCCTGCCGCTGGCGACGCAGGCGCGCGAGGTCGTCGGCATCGAAGGCAGTACGGCCCTGACGACGCGCGCGCTGGAAAACGCCCGTGCCAACGGCCTCGCCGACAAGACGACGTTCTACACGCGTAACCTGTTCGAGGTCACGAAGGACGACCTGGTCGCGCTGGGCAAATTCGACCGCATGCTGGTCGACCCGCCGCGCGACGGCGCCGTCGCACTGGCCATCGCGCTGGCCGAGCTGCGCCTGACCCATCCCGAACTCATGCCGAAGCGGATCGTGTATGTGTCGTGCAGCCCGGCCACGCTGGCGCGCGATAGCGGCATCCTCACGCACCGCGCCGGTTATGTGCTGAAGAAGGCGGGCGTGGCGAACATGTTCCCGCATACGTCGCACGTGGAATCGATCGGCGTGTTCGAGCTCCTCGACGATTTCCAGCCGCGCGAGTTCAACGCGCCGCAAGTCGCGGAATAA
PROTEIN sequence
Length: 462
MQETFINIKSLDMDARGVGHLENEDGTPGKVIFVEGALPGERVSFETLRKKKNWESGRMVTLQKASSMRVEPKCPHFWHCGGCSMQHLEPSAQVAMKQRVLEDNLWHIGKTKAENIMRPMYGPTWDYRYRARLSVRYVARKGTVLVGFHERHSSYVADMTSCEILPDHISAMLVPLRELVGALSIYQQMPQIEVAVGEDVTVLVLRIMAPLAPADEKLVKEFADKWNIQWWLQPKGPDTAAPYYPLDKELYYSLPEFGIRMPFKPTDFTQVNHQINRLLVHKALGLLEVQPTDRVADLFCGLGNFTLPLATQAREVVGIEGSTALTTRALENARANGLADKTTFYTRNLFEVTKDDLVALGKFDRMLVDPPRDGAVALAIALAELRLTHPELMPKRIVYVSCSPATLARDSGILTHRAGYVLKKAGVANMFPHTSHVESIGVFELLDDFQPREFNAPQVAE*