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A3-16-all-fractions_k255_354347

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_354347_1
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2..529
DNA (528bp) protein (176aa)
recombinase RecA n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6EC74
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
recA protein
A3-16-all-fractions_k255_354347_2
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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537..1106
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036531E4
regulatory protein RecX
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
A3-16-all-fractions_k255_354347_3
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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1507..3246
DNA (1740bp) protein (580aa)
Ribonuclease Y {ECO:0000255|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000255|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00335};; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
ribonuclease Y n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B319BE
RNA binding metal dependent phosphohydrolase
A3-16-all-fractions_k255_354347_4
unknown

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comp(3262..3513)
DNA (252bp) protein (84aa)

This feature has no annotations

A3-16-all-fractions_k255_354347_5
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

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3556..4968
DNA (1413bp) protein (471aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B2FB61
MiaB family RNA modification protein
A3-16-all-fractions_k255_354347_6
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4976..5470)
DNA (495bp) protein (165aa)
Limonene-12-epoxide hydrolase n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4I8N9_MYCRH
Limonene-1,2-epoxide hydrolase {ECO:0000313|EMBL:CDO10829.1}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
limonene-1,2-epoxide hydrolase
A3-16-all-fractions_k255_354347_7
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(5505..6689)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B42C2E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG04532.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
A3-16-all-fractions_k255_354347_8
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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6746..7420
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AAB0_THECD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY98823.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
A3-16-all-fractions_k255_354347_9
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7417..8322
DNA (906bp) protein (302aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1262452 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B37308
tRNA delta(2)-isopentenylpyrophosphate transferase
A3-16-all-fractions_k255_354347_10
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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8319..9158
DNA (840bp) protein (280aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=680198 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
diaminopimelate epimerase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5B59E
diaminopimelate epimerase
A3-16-all-fractions_k255_354347_11
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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9202..10596
DNA (1395bp) protein (465aa)
ATP-binding protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B79F5C
GTP-binding proten HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
A3-16-all-fractions_k255_354347_12
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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10709..11041
DNA (333bp) protein (111aa)
Sec-independent protein translocase protein TatA n=1 Tax=Rhodococcus opacus (strain B4) RepID=TATA_RHOOB
tatA; twin arginine translocase protein A
Sec-independent protein translocase protein TatA {ECO:0000255|HAMAP-Rule:MF_00236}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
A3-16-all-fractions_k255_354347_13
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(11062..11982)
DNA (921bp) protein (307aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
LexA family transcriptional regulator (EC:3.4.21.88)
LexA repressor n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SDC2_GEOOG
A3-16-all-fractions_k255_354347_14
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12257..12721
DNA (465bp) protein (155aa)
peptidoglycan-binding protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B78A24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH89680.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
A3-16-all-fractions_k255_354347_15
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13078..13551
DNA (474bp) protein (158aa)
NrdR family transcriptional regulator n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B35AAA
nrdR; Transcriptional regulator
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
A3-16-all-fractions_k255_354347_16
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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13731..16625
DNA (2895bp) protein (965aa)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:ADB33714.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ADB33714.1};; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (EC:1.17.4.1)
vitamin B12-dependent ribonucleotide reductase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B425A1
Displaying 16 items

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