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A3-16-all-fractions_k255_7224116_5

Organism: A3-16-all-fractions_metab_conc_22

partial RP 28 / 55 MC: 2 BSCG 33 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(4373..4987)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H4H2_CELFA similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 178.0
  • Bit_score: 171
  • Evalue 6.50e-40
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 178.0
  • Bit_score: 171
  • Evalue 1.80e-40
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEE47767.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 178.0
  • Bit_score: 171
  • Evalue 9.10e-40

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Taxonomy

Cellulomonas fimi → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 615
GTGGCGGCCAACCTCGCCCGCATCGAGATTCATCCCGCTCGGCACGTGAGAATCGAGGCCGGCCGGACACTACGTGTCGTGGAGGGAAACCAGCCGGACACCGACCGCTTCGCCGCGATGTTCGGCCAGCTGTCCCCGCGCGTCTATGCGTACGCGCGTCGGCACTGCGACCCGGCCACGGCTCAGGACGTTGTCGGCGACACCTTCCTGGTCGCCTGGCGGCGGTGGGCCGAGGTGCCGGAGACGCCCCTGCCCTGGCTGCTCGTGGTCGCGCGGAACGCGCTGGCCAACCGGTCGCGATCGGCCATGCGCCAGCACCGGCTGGAGAACACGATCGCGCAGCTGGCTGCGGTGGCCGGGGCGGCCGGCGGAGCCGACGCCGGCGTGCTGGATCGCGAAGAGGTGCTCACCGCGATCGCCGCGCTGACCGACCTCGAGCGCGAGGCCGTCTTGATGGTCGCTTGGGACGGCTTGGACAACCGGCAGGCGGCCGCAGTCGCCGGGTGCTCGGTGCGGGCCTTCGAGGTGCGCCTCTCACGCGCGCGGGCCCGGCTGACCCGCTCCTTGAACTCGAACGACAGCGGCGCCGAGGTCGCGCTGCGGAAGGCCCGGTGA
PROTEIN sequence
Length: 205
VAANLARIEIHPARHVRIEAGRTLRVVEGNQPDTDRFAAMFGQLSPRVYAYARRHCDPATAQDVVGDTFLVAWRRWAEVPETPLPWLLVVARNALANRSRSAMRQHRLENTIAQLAAVAGAAGGADAGVLDREEVLTAIAALTDLEREAVLMVAWDGLDNRQAAAVAGCSVRAFEVRLSRARARLTRSLNSNDSGAEVALRKAR*