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A3-16-all-fractions_k255_879846_4

Organism: A3-16-all-fractions_metab_conc_22

partial RP 28 / 55 MC: 2 BSCG 33 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 4323..5234

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B47A7B similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 314.0
  • Bit_score: 300
  • Evalue 1.80e-78
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EXG80988.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 287.0
  • Bit_score: 303
  • Evalue 2.30e-79
RNA polymerase sigma factor rpoD similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 272.0
  • Bit_score: 289
  • Evalue 9.00e-76

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Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGAATCTCTCGCCCGAGCTTTCCGGCTCCAGCGGTGCGACCGCCGACGAACTGGTCGAGGGCAACCTCCCGCTGGTCGGCCACCTGGTCCGCGAGGTGCTGGCCAAGGTGCCGCTGCACGTCAGCCGTGACGAGCTCAGCTCGGCCGGGATGATGGCGCTGGTCGTCGCCGCCCAGAGCTACGACCCGGAGCGCGGCGTGCCGTTCGTGCGCTACGCCAGCATCCGGATCCGCGGAGCCCTCCTGGACGAGCTGCGCTCGATGGACTGGGCGGCCCGCTCGGTGCGTACCCAGGCCCGCGAGATGGAGACCGTCGAGCACCAGCTCGCCTCCGCGCTGGGCCGCACGCCGCGCCCGGCTGAGCTGGCCGTCGCCCTCGGCGTGTCGTTGACCGAGCTCGAGTCGCTGCGCTACGACGTCGCCCGCGCCCGCACGCTCAGCCTGCAGGGCTTCGCGCCGGAGACCGGCCCGGAGCTGATGGCCGACGGCACCGACGGCCCCGAAGGACTGCTGCTGTTCCGCGAGAAGCTCGGCTACCTGCACCAGGCGATCGAAGCCCTGCCGGAGCGTCTGCGGTACGTCGTCGTCTCCTACTTCTTCGAGCAGCGCCAGATGGCCGACATCGGCGCCGAGCTCGGCGTCACCGAGTCGCGGGTCTCGCAGCTGCGCGCCGAGGCGCTGCGGGTGCTGCGGGACGGCATCAACTCCCAGCTCGAGCCGGAGATCGTCGAGGAGCCGGCCGCCAAGGGCCGCGCCTCGGCCAGCCGCAAGGCCTACCTCTGCGCGGTCGCCGAGGGTGGCACGATAGCCAGCCGCCTGGCGGCGACCACGCCGATCGGCGACGTGCGCCCCGAGGCCCGCCCCCGGCTGACGGCGCGCGCCACCAAGTGCACCCGAAGCCGCATCGCCTAG
PROTEIN sequence
Length: 304
MNLSPELSGSSGATADELVEGNLPLVGHLVREVLAKVPLHVSRDELSSAGMMALVVAAQSYDPERGVPFVRYASIRIRGALLDELRSMDWAARSVRTQAREMETVEHQLASALGRTPRPAELAVALGVSLTELESLRYDVARARTLSLQGFAPETGPELMADGTDGPEGLLLFREKLGYLHQAIEALPERLRYVVVSYFFEQRQMADIGAELGVTESRVSQLRAEALRVLRDGINSQLEPEIVEEPAAKGRASASRKAYLCAVAEGGTIASRLAATTPIGDVRPEARPRLTARATKCTRSRIA*