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A3-16-all-fractions_k255_1553760_4

Organism: A3-16-all-fractions_metab_conc_22

partial RP 28 / 55 MC: 2 BSCG 33 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(2776..3369)

Top 3 Functional Annotations

Value Algorithm Source
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 193.0
  • Bit_score: 289
  • Evalue 4.50e-76
3-isopropylmalate dehydratase small subunit {ECO:0000255|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000255|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000255|HAMAP-Rule:MF_01031}; Short=IPMI {ECO:0000255|HAMAP-Rule:MF_01031};; Isopropylmalate isomerase {ECO:0000255|HAMAP-Rule:MF_01031}; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 193.0
  • Bit_score: 289
  • Evalue 2.20e-75
isopropylmalate isomerase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B68E56 similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 197.0
  • Bit_score: 333
  • Evalue 9.50e-89

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Taxonomy

Thermobifida fusca → Thermobifida → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGGACAAGTTCACGGTCCACACCGGCACCGCGGTGCCGCTGCGCCGCAGCAACGTCGACACCGACCAGATCATCCCGGCGGTGTACCTGAAACGGGTCACCCGCACCGGCTTCGAGGACGGCCTGTTCAACGCCTGGCGCGCCAACGAGCCGCAGTTCGTGCTCAACCAGCCGCAGTACCGGGCGGCGACGATCCTGGTCGCCGGGCCTGACTTCGGTACCGGCAGCTCGCGGGAGCACGCGGTGTGGGCGCTGATGGACTACGGCTTCAAGGTCGTGATCTCGCCGCGGTTCGCCGACATCTTCCGCGGCAACTCGCTCAAGGCCGGCCTGCTCACCGTGCAGTTGCCGGAGAAGATCGTGCAGCGCCTGTGGGACGACATCGAGGAGAACGCCGAGGTGCAGGTGACGGTCGACCTGCAGGAGCGGCAGGTGCGCTGGGCCGGCGAGGTTCACGACTTCGAGCTCGACGACTACACCCGCTGGCGGCTGCTCGAAGGCCTGGACGACATCGGCCTGACGCTGCGCAACTTCGACGCCGTGGAGCAGTACGAGCTGACGCGCAAGCCGTGGCTGCCGAAGGTCGGCGTCTGA
PROTEIN sequence
Length: 198
MDKFTVHTGTAVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFNAWRANEPQFVLNQPQYRAATILVAGPDFGTGSSREHAVWALMDYGFKVVISPRFADIFRGNSLKAGLLTVQLPEKIVQRLWDDIEENAEVQVTVDLQERQVRWAGEVHDFELDDYTRWRLLEGLDDIGLTLRNFDAVEQYELTRKPWLPKVGV*