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A3-16-all-fractions_k255_1727984_4

Organism: A3-16-all-fractions_metab_conc_22

partial RP 28 / 55 MC: 2 BSCG 33 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 3111..3695

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigC n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B2F3D4 similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 179.0
  • Bit_score: 215
  • Evalue 3.70e-53
sigC; RNA polymerase sigma-C factor similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 177.0
  • Bit_score: 196
  • Evalue 3.90e-48
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 177.0
  • Bit_score: 196
  • Evalue 1.90e-47

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Taxonomy

Blastococcus saxobsidens → Blastococcus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGGTTCCCGGCGTGGTGCACGTCACGGAGGACGACGAGGACATGAACGAGCGGGACGACGGTTTCGACGAGCTCACCCAGGCGGCGTTGCGCGCGCGCCGGGGCGATGCCGCCGCCGCCGCCACGTTCGTCCGGGCGACGCAGGCCGACGTGTGGCGGATGTGCGCGCACCTCGGCTCGCCCGCCCAGGCCGACGACCTGACCCAGGACACCTACGCCCGCGCCTTCGCCTCCCTGCACCGCTTCCTCGGCCGCGCGTCGGCCCGCACCTGGCTGCTGGCCATCGCCCGACGGGTCTGCGCCGACGCCGTGCGCTCGGCCGTGCGGGAGCGGCGGATGACGGCGGCGCCCGCGCGGGTGGTCGACGACCCGGCGTCGACCGTGGTGGTGCGCTCGCTGGTGGCAGCGCTGGAGCCGGAGCGGCGGGAGGCGTTCGTCCTCACCCAGATCGTCGGGCTCTCCTACGCCGAGGCGGCCGACGTGTGCGACTGCCCGGTGGGGACGATCCGGTCGCGGGTCGCGCGCGCCCGGGCCGACCTGGTGGCGGCGCTGGAGAGCGGTCAGTCGGCGGCCGGCACCGGCTGA
PROTEIN sequence
Length: 195
MVPGVVHVTEDDEDMNERDDGFDELTQAALRARRGDAAAAATFVRATQADVWRMCAHLGSPAQADDLTQDTYARAFASLHRFLGRASARTWLLAIARRVCADAVRSAVRERRMTAAPARVVDDPASTVVVRSLVAALEPERREAFVLTQIVGLSYAEAADVCDCPVGTIRSRVARARADLVAALESGQSAAGTG*