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A3-16-all-fractions_k255_3918642_10

Organism: A3-16-all-fractions_metab_conc_22

partial RP 28 / 55 MC: 2 BSCG 33 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(11108..12064)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4800E similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 306.0
  • Bit_score: 336
  • Evalue 1.80e-89
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ELS54288.1}; TaxID=1160705 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 314.0
  • Bit_score: 307
  • Evalue 2.20e-80
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 313.0
  • Bit_score: 306
  • Evalue 5.70e-81

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Taxonomy

Streptomyces viridochromogenes → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 957
ATGCGCGATGATCTGTCCATGGGCGAGGACGTCTCCGAACTGCGGCCGCTGCTGTTCGCCATCGCCTACCGCATGCTCGGCAGCGTCACCGACGCGGAGGACGTCGTGCAGGAGGCGTTCCTGCGGCACCACCGCGCCGTCACGGACGGCACCCGGATCGAGTCGCCCAAGGCGTTCCTGTCGGCCGTCACGACCCGGCTGGCGATCGACCACCTGCGCTCGGCCCGGGTCCGCCGCGAGACCTACGTCGGGCAGTGGCTGCCCGAGCCGTTGCTGACCGACCGGGCCGCCCCCGACCCGGCGGCCGGGGCGGCCGCCGCCGACTCGCTGTCGATGGCGTTCCTGCTGGTGCTCGAACGGCTGAGCCCGGTCGAGCGGGCCGTGTTCCTGCTGCACGACGTGTTCGAGTACGACTTCGCCGAGATCGCGCCGATCGTCGACAAGTCGGTCGAGAACTGCCGGCAGATCGCGGTGCGGGCCCGCAAGCACGTCACGGCCCACCGGCCCCGATTCGCCGCGTCGGCCGAGCACCGCGACCGGCTGGCCGACCGGTTCGTCGCCGCGCTGACCGAGGGCAAGGTCGAGGGGCTCGTCGAGCTGCTGGCCGCCGACGTGGTCGTCACCGGCGACAGCGGGGGCATGCGTCCCTCGTGGCCGCGGGAGATCGTGGGCCGGGACAAGGTGGTGCGAGTGCTGGCCGGGGTGGCGGCGCAGATGGCCGCCGTCGGCGGCCTCCGGCTCGAGCGCACCGAGGTCAACGGCCAGCCGGGCGCCCTCATGCTCGACGCCGGTGGGGGGCTGATCAACGTGTTCGCCTTCGACATCGAGGACGGCCAACTGCACGCCATCCGGTCGGTGATCAACCGGGACAAACTGCGCCACCTCGTCCCGGTCGTGGGTCCGCTCGCCGACGTCGAGGCGCTGCGCAAAGCGGCTATCCTGGCCCGCGAGCCGTGA
PROTEIN sequence
Length: 319
MRDDLSMGEDVSELRPLLFAIAYRMLGSVTDAEDVVQEAFLRHHRAVTDGTRIESPKAFLSAVTTRLAIDHLRSARVRRETYVGQWLPEPLLTDRAAPDPAAGAAAADSLSMAFLLVLERLSPVERAVFLLHDVFEYDFAEIAPIVDKSVENCRQIAVRARKHVTAHRPRFAASAEHRDRLADRFVAALTEGKVEGLVELLAADVVVTGDSGGMRPSWPREIVGRDKVVRVLAGVAAQMAAVGGLRLERTEVNGQPGALMLDAGGGLINVFAFDIEDGQLHAIRSVINRDKLRHLVPVVGPLADVEALRKAAILAREP*