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A3-16-all-fractions_k255_2066017_7

Organism: A3-16-all-fractions_metab_conc_22

partial RP 28 / 55 MC: 2 BSCG 33 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(6481..6858)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Actinopolymorpha alba RepID=UPI000376A807 similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 125.0
  • Bit_score: 217
  • Evalue 4.80e-54
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KJK43772.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 125.0
  • Bit_score: 216
  • Evalue 2.00e-53
rpoE; RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 125.0
  • Bit_score: 214
  • Evalue 1.20e-53

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Taxonomy

Lechevalieria aerocolonigenes → Lechevalieria → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 378
GTGGCTCCGGGGCGCTACCAGATCCTCGCCGCGATCAACGCCGTGCACACCTCGGCCCGCGACGCGCGTGACACCGACTGGTCACAGGTCGTCGCTCTCTACGACCAGCTCGTCCGCCTCGACCCCTCGCCGATCGTCGCCCTCAACCGGGCCATCGCGGTCGGCGAGCTCGACGGGCCGGACGTGGCCCTGGCGGCCGTCGACCGGCTCGAGGACAAGCTCGTCGGCTATCACGCCTACCACGCCACCCGCGCGGAACTGCTGCGCCGGCTGGGTCGCACCCCGGAGTCGCGCGCTGCCTACGGCAAAGCCGCCGAGCTGGCCGGCAACACCGCCGAGATCGCCTACCTGACCCGCCGCCGTGATCAACTTCGGTAA
PROTEIN sequence
Length: 126
VAPGRYQILAAINAVHTSARDARDTDWSQVVALYDQLVRLDPSPIVALNRAIAVGELDGPDVALAAVDRLEDKLVGYHAYHATRAELLRRLGRTPESRAAYGKAAELAGNTAEIAYLTRRRDQLR*