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A3-16-all-fractions_k255_2908616_6

Organism: A3-16-all-fractions_metab_conc_22

partial RP 28 / 55 MC: 2 BSCG 33 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 4527..5573

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6CCD8 similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 319.0
  • Bit_score: 379
  • Evalue 2.70e-102
RNA polymerase sigma-70 factor, TIGR02960 family similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 315.0
  • Bit_score: 332
  • Evalue 1.10e-88
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 315.0
  • Bit_score: 332
  • Evalue 5.30e-88

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Taxonomy

Mycobacterium smegmatis → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1047
ATGACGAGCACCGCGGCGGCGAGATCCGGCCGCGACGAGTTCTTGCACGACGCGGAGGCGTACCGGCGCGAATTGATCGCGCACTGTTACAAGATGGTCGGTTCGGCTCAGGACGCCGAAGACCTCGTCCAGGAGACGTTGTTGCGGGCCTGGCGCGGCTACGAATCGTTCGAAGGCCGCTCGTCGGTGCGCACCTGGCTGTATCGCATTGCCACGAATCTGTGCCTGACGTCGCTCAGTCATGGCCGGCGCCGCGTGCTTCCCTCCGGGCTTGGTGCCGCCGGCGACGACCCGACCGTGCCGATGTCGCCAGCGGCCGCGGACGTGTTGTGGATCGACCCGCTCCCGACCGCCACAGTCGAGACGGTGGCCAACGCCGACCCGGCCGACGTGGTGGCCGCGCGATCAGGCCTGCGGCTGGCGCTGATCGCCAGCCTGCAGCACCTGCCGGCCCGGCAACGCGCTGCGTTCATCCTCCGGGAGGCACTCGGCTATTCGGCGCGAGAGATCGGCGAGATGCTCGACATGACGCCGGTCGCGGTGAAGAGCGCCCTGCAGCGGGCCCGGGCGACGTTCGATGACACGCGACCCGCTGCCGACGAGCTGGTGGAGCCGACGTCGTCGGAGGCGCGGGCCGTCCTGGACCGCTACATGGACGCCTTCCAGCGGGCCGACGTCGCCGCGATGAACGATCTGCTCCGCGCCGACGCATCCCTCGAGCTGGTGCCGTCGCCCACCTGGTTCAAGGGCAAGCGGACGTGCCTCGCGCAGCTCGAGCTGCGGGCGCTCACCGCGCCGGGCGTGTTCCGCATGTTGCCGACGACGGCGAACGAGCAAACGGCCGCGGTCGTGTACCGGCGGGACGACGGCGTTACGTACGTGCCCTACGGCGTCGTCGTCCTCGGCGTGGCCGGCGGGGGGATTTCGTCGATCACCGTGTTCGCCGAACCTGCCCTCGTCGGCCGGTTTGGCTTCCCGTCGCAGCCGGGCGAAGTCCCGTCAGTGCGCAGCGAGCAGCAAACAGCGACAGCTCACAGCAGCCGGTAG
PROTEIN sequence
Length: 349
MTSTAAARSGRDEFLHDAEAYRRELIAHCYKMVGSAQDAEDLVQETLLRAWRGYESFEGRSSVRTWLYRIATNLCLTSLSHGRRRVLPSGLGAAGDDPTVPMSPAAADVLWIDPLPTATVETVANADPADVVAARSGLRLALIASLQHLPARQRAAFILREALGYSAREIGEMLDMTPVAVKSALQRARATFDDTRPAADELVEPTSSEARAVLDRYMDAFQRADVAAMNDLLRADASLELVPSPTWFKGKRTCLAQLELRALTAPGVFRMLPTTANEQTAAVVYRRDDGVTYVPYGVVVLGVAGGGISSITVFAEPALVGRFGFPSQPGEVPSVRSEQQTATAHSSR*