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A3-16-all-fractions_k255_2976234_2

Organism: A3-16-all-fractions_metab_conc_22

partial RP 28 / 55 MC: 2 BSCG 33 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(371..1246)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B47A7B similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 280.0
  • Bit_score: 244
  • Evalue 8.60e-62
putative RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 262.0
  • Bit_score: 239
  • Evalue 1.00e-60
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:AGZ44635.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 262.0
  • Bit_score: 239
  • Evalue 5.10e-60

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Taxonomy

Actinoplanes friuliensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGAAGGTAGTGCGCGCGCACCGACTCAGCGAGACGGCCGGCCAACTGGTCGAAGCCCACCTGCCGCTGGTCGGGCACCTCGTCCGCGAGACGATGCAGCGAGTGCCCCGGCACGTCCACGTCGACGACCTCACCTCGGCGGCGACGACGGCGTTGGTGCTCGCCGCCCGCAACTTCGACGCCGCCCGGGGCGTCCCCTTCTCGGCCTACGCCCGGCTGTGCATCCGCGGCGCGCTGGTGGACGAGCTGCGCGGCATGGACTGGGCCTCGCGCCGGGTCCGGCGCTCGGCCCGCAGCCTGCAGAGCGTCGAGGAGCAACTGACCGGCGTGCTCGGGCGCACCCCGACCACGCAGGAGATCGGCGCCGCGACCGGCCTGTCGGCCGACCAGGTCGCCGACATCCGCCGCGAGGCCGACCGCGCGACCGTGGTCAGCCTGGACGCACTGGAGGGCCCCGGCACCGTCGCCGCCGGTCCCAGCGGCGACGACCCGGAGTCACTCATCCTGCTGCGCGAGCGGCTCGGCTACCTGCACGACGCCCTGGCCGAGCTGCCCGAGCGCCTGCGCTTCGTTGTCGTCGCGTACTTCTTCGAGCAGCGCCCCCAGCTCGAGATCGCCACCGAGCTGGGCGTCACGACATCTCGGGTCTCCCAGCTGCTGTCCGAAGCGCTACGGCTGCTGAATGCCGGGCTGCGCGCACATCTGAACCCGGCCGCTGCGCCGACCCGGCCCGGGCGTAGCGCCCACATGGCCGTGGTGACCGACCGCTACGCCTCGGCTGTCGCCGCCCGGTCGAGCGTGGCCGGCCGCCTCGGCGTGACCACGACGCTCGGCGACGGTTACCTCCGCGAGGCGGCGACGCGCCTCGGCGCCTGA
PROTEIN sequence
Length: 292
MKVVRAHRLSETAGQLVEAHLPLVGHLVRETMQRVPRHVHVDDLTSAATTALVLAARNFDAARGVPFSAYARLCIRGALVDELRGMDWASRRVRRSARSLQSVEEQLTGVLGRTPTTQEIGAATGLSADQVADIRREADRATVVSLDALEGPGTVAAGPSGDDPESLILLRERLGYLHDALAELPERLRFVVVAYFFEQRPQLEIATELGVTTSRVSQLLSEALRLLNAGLRAHLNPAAAPTRPGRSAHMAVVTDRYASAVAARSSVAGRLGVTTTLGDGYLREAATRLGA*