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A3-16-all-fractions_k255_138014_10

Organism: A3-16-all-fractions_metab_conc_44

partial RP 34 / 55 MC: 1 BSCG 37 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: comp(8284..9165)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma subunit, ECF family n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2JGN3_FRASC similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 280.0
  • Bit_score: 349
  • Evalue 1.90e-93
RNA polymerase sigma 70 {ECO:0000313|EMBL:KKA41445.1}; TaxID=1354891 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 293.0
  • Bit_score: 352
  • Evalue 5.40e-94
sigma-24 similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 280.0
  • Bit_score: 349
  • Evalue 5.40e-94

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Taxonomy

Streptomyces sp. MUSC164 → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGACCGAACGCGACGCCATAACCCAGGAGTTCGAGCGGCAGCGACCGCACCTGCGCGCGGTGGCGTACCGCATGCTCGGCTCGGTGAGCGAGGCGGACGACGCCGTTCAGGAAGCGTGGCTGCGGCTCAACCGCTCGGACACCGACGGCGTTTCCAATCTCGGCGGCTGGCTGACCACGGTCGTCGCGCGCGTGAGCCTCGACATGTTGCGAGTGCGCCGCTCGCGCCACGAGGAGTACGTGGGCAGCTGGCTGCCAGAGCCGATCGTCTCCGTCGACGAGGAGGCCGACCCGGAGCGGCAGGCGCTGCTCGCCGACTCGGTGGGACTGGCTCTGCTTGTGGTGCTCGAGGCCCTGTCGCCGTCGGAGCGGCTCGCGTTTGTGCTGCACGACATGTTCGGGCTTCCGTTCGAGGAGATCGCGCCGATCGTGGAGCGCACCCCGGAGGCCGCGCGCCAGCTCGCGAGCCGCGCGCGCCGGCGAGTGCGGGGCACGCCGCCGCCGACCGACGCCGACCCGTCTGAGCAGCGCAAGGTGGTCGACGCGTTCCTCGCGGCCGCGCGTGCGGGCGACTTCGCTGGACTCGTTGCGATTCTCGACCCCGACGTGGTCTTCAACCTCGATGCCGGCGGTGCGCCGCCGCGGGCGCGCGAGCCTGTGGTGGGTGCCGAGGCGGTGGCGAGGGAGGTCGTGACGAGTGGCTACCGCGGCCTGGCCCGCGCGGCGCGGCCCGCAATCGTCAACGGCGCCGCCGGCTTCGTGATCGCGCCGGCCGGCCAACCCCTTGCCGTTATCGGCTTCACCATGCGCGATGGCCGCATCGTGGAGATCGACCTCGTGGCCGATCCCGACAAGCTCCGTGGGGTGAGCATGCCGCTCTAA
PROTEIN sequence
Length: 294
MTERDAITQEFERQRPHLRAVAYRMLGSVSEADDAVQEAWLRLNRSDTDGVSNLGGWLTTVVARVSLDMLRVRRSRHEEYVGSWLPEPIVSVDEEADPERQALLADSVGLALLVVLEALSPSERLAFVLHDMFGLPFEEIAPIVERTPEAARQLASRARRRVRGTPPPTDADPSEQRKVVDAFLAAARAGDFAGLVAILDPDVVFNLDAGGAPPRAREPVVGAEAVAREVVTSGYRGLARAARPAIVNGAAGFVIAPAGQPLAVIGFTMRDGRIVEIDLVADPDKLRGVSMPL*