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A3-16-all-fractions_k255_6257996_6

Organism: A3-16-all-fractions_metab_conc_75

partial RP 26 / 55 MC: 6 BSCG 26 / 51 MC: 7 ASCG 10 / 38 MC: 2
Location: comp(4015..4440)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SIQ7_METPP similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 141.0
  • Bit_score: 276
  • Evalue 1.30e-71
RNA polymerase sigma(sigma-70) factor transcription regulator protein similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 141.0
  • Bit_score: 276
  • Evalue 3.70e-72
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 141.0
  • Bit_score: 276
  • Evalue 1.80e-71

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Taxonomy

Methylibium petroleiphilum → Methylibium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 426
TTCGGCTTCGAGCCGGACGCCCCGACGCTGGCCGAGAAGATGGAGATGCCCGAGGACAAGATCCGCAAGATCATGAAGATCGCCAAGGAGCCGATCTCCATGGAGACGCCGATCGGCGACGACGACGACTCGCACCTGGGCGACTTCATCGAGGACACCAACAACCTCGCGCCGGTCGAGGCCGCGATGCACGCCGGCCTGCGCGACGTGGTCAAGGACATCCTCGACAGCCTGACCCCGCGCGAGGCCAAGGTGCTGCGCATGCGCTTCGGCATCGAGATGTCCACCGACCACACGCTGGAAGAAGTGGGCAAGCAGTTCGACGTCACGCGCGAACGCATCCGCCAGATCGAGGCCAAGGCCATCCGCAAGCTCAAGCACCCGAGCCGGTCGGACAAGCTGCGCACCTACCTGGACAACCTTTAA
PROTEIN sequence
Length: 142
FGFEPDAPTLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDTNNLAPVEAAMHAGLRDVVKDILDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQIEAKAIRKLKHPSRSDKLRTYLDNL*