ggKbase home page

A3-16-all-fractions_k255_3239838_2

Organism: A3-16-all-fractions_metab_conc_75

partial RP 26 / 55 MC: 6 BSCG 26 / 51 MC: 7 ASCG 10 / 38 MC: 2
Location: 2298..2657

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XYZ9_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 112.0
  • Bit_score: 188
  • Evalue 3.00e-45
integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 112.0
  • Bit_score: 188
  • Evalue 8.50e-46
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 112.0
  • Bit_score: 188
  • Evalue 4.20e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGACCGACCCGACGCGCAACGACTCCGTCATCCTGCCTTCGCTGGAGACGCCCACGCTGACCAAGGCCGAACTCGCCGAGCTGTTGTTCGACCGCATCGGCCTGAACAAGCGCGAGTCCAAGGACATCGTCGAGGCCTTCTTCGACCTGCTGCACGAGGCGCTGGTCAAGGGCCAGGAAGTCAAGCTGTCGGGCTTCGGCAACTTCACGATCCGCGAGAAGGGCTCGCGCCCGGGGCGCAATCCGCGCACCGGCGAGTCGGTGCCGATCAAGGCGCGCAACGTCGTCACCTTCCATTCGAGCCACAAGCTCAAGGCCATCGTTCAAGGCGACATTCCCCCGCCCGAAGACTTCGAGTAA
PROTEIN sequence
Length: 120
MTDPTRNDSVILPSLETPTLTKAELAELLFDRIGLNKRESKDIVEAFFDLLHEALVKGQEVKLSGFGNFTIREKGSRPGRNPRTGESVPIKARNVVTFHSSHKLKAIVQGDIPPPEDFE*