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A3-16-all-fractions_k255_3254464_16

Organism: A3-16-all-fractions_metab_conc_75

partial RP 26 / 55 MC: 6 BSCG 26 / 51 MC: 7 ASCG 10 / 38 MC: 2
Location: 13424..14104

Top 3 Functional Annotations

Value Algorithm Source
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Herbaspirillum sp. CF444 RepID=J2U8L7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 221.0
  • Bit_score: 290
  • Evalue 8.10e-76
Variovorax paradoxus strain MEDvA23 contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36258.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 223.0
  • Bit_score: 330
  • Evalue 9.90e-88
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 223.0
  • Bit_score: 290
  • Evalue 3.00e-76

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGAACCGCATCGCCCTCGTCGAAGACCACGAACGCCTGTCCATGCTGGTGCGCAAGGCGCTTGCCTCGGCCGGCATCGAGGTCGACGTGTTCGATCGCATCGCCAGCGCCCGCCACGCCATCGCCGAGACGCCGTACGGCGCCATCGTCGTCGACCGTGGGCTGCCCGACGGCGACGGACTGTCGCTGGTGCGCAAGCTGCGCGCCGAGGGCAACGTCACGCCCTGCCTGATGCTGACGGCGCGCGACGCCGTGCATGACCGCGTCGAGGGCCTGGAGGCGGGTGCGGACGACTACCTGGCCAAGCCGTTCTCGATGGAGGAACTCGCGGCCCGGGTGCGCGCGCTGCTGCGCCGGCCGGCCGCGATGCAGAGCCTGAACCCTTCGTTCGCCGACATCCAGCTCGCGCCCGACCAGGGCACGATGAGCTGCGGCGCCGAGACCGTGACGCTGCCGTCGGCCGAGTTGCAGATCATGCTTTGCCTGGTCAAGGCGCAGGGCCTGGTCGTGCGGCGCGGCGCGCTGGAAGCCGCGGCCTGGGGCCTGATCGAGGCCGTCACGCCCAACGCGCTGGACGTCGCGCTGCACCGCTTGCGCAAGAAGCTGCAGGCGATCGGCTCGGCGCTGCAGGTGATCAACGTGCGCGGGCACGGTTATGCGCTGCGATCCGATGCGCACTGA
PROTEIN sequence
Length: 227
MNRIALVEDHERLSMLVRKALASAGIEVDVFDRIASARHAIAETPYGAIVVDRGLPDGDGLSLVRKLRAEGNVTPCLMLTARDAVHDRVEGLEAGADDYLAKPFSMEELAARVRALLRRPAAMQSLNPSFADIQLAPDQGTMSCGAETVTLPSAELQIMLCLVKAQGLVVRRGALEAAAWGLIEAVTPNALDVALHRLRKKLQAIGSALQVINVRGHGYALRSDAH*