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A3-16-all-fractions_k255_3823040_4

Organism: A3-16-all-fractions_metab_conc_75

partial RP 26 / 55 MC: 6 BSCG 26 / 51 MC: 7 ASCG 10 / 38 MC: 2
Location: 3384..4397

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 309.0
  • Bit_score: 461
  • Evalue 9.50e-127
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 309.0
  • Bit_score: 453
  • Evalue 4.00e-125
23S rRNA methyltransferase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034C13A8 similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 308.0
  • Bit_score: 485
  • Evalue 3.40e-134

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Taxonomy

Rubrivivax benzoatilyticus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
ATGAGTACAGAGCAACAGGGCGGCGGCAAGGGCCGCGGCCGTCATCGCAGGGACCGCAACGCAGGCCCGGCACCGGGCGTTTCCGACAACGAGTGGCTCAAGGTCACCGGCATCGACCTCGACGCGCAAGGCATCGCGCACAACAGCGAAGGCATCGTCGTGTTCATCGACGGCGCGCTGCCGGGCGAGGAGGCGCGGGTCAAGGTCATCAAGCGCAAGAAGCAGTGGGAAAAGGCCGACCTGGTGGCGATCCGCCGCGAGAGCTCGCAGCGCGTCACGCCACGCTGTCCGCACTTCGGCTTGCATGCCGGCGCATGCGGCGGCTGCAAGATGCAGCACCTGGCGCCCTCGGCCCAGGTGGCGATGAAGCAGCGCGTGCTGGAGAACAATCTCTGGCACCTGGGCAAGGTGCGGCCCGAGATGGTGCTGCGGCCGATCGAGGGCCCGCCCTGGGGCTACCGGTTGCGCGCGCGGCTGTCGGTGCGCTGGGTCGCCAAGAAGAACACCGTGCTGGTGGGCTTTCACGAGCGCAAGTCCAGCTACGTGGCCGACATGCGCGAATGCCACGTGATGCCCAAGCGCATCTCGGACATGCTGCTGCCGCTGCGCGCGCTGATCGAGGCGATGCAGGCGCGCGAGCGGCTGCCGCAGATCGAGGTCGCCATCGGCGACCAGGTGACCGCGCTGGTGCTGCGCAACCTGGAGCCCATGAGCGAGCACGACATGGCCTTGCTGCGCAGCTTCGGCAAGGCGCACGGCGTGCAGTGGTGGCTGCAGCCCAAGGGCCCGGATACCGTGGTGCGCATCGACGACGAAGGCCCGGAGCTCGCCTACACGCTGCCCGAGTTCGGCGTGCGCATGCCGTTCAAGCCGACCGACTTCACGCAGGTCAACCACCAGATCAACACGGTGCTGGTCGGCCGCGCGCTGCGCCTGCTGGACGTGCGCAAGGACGAGACGGTGATCGACTGGTTCTGCGGCCTGGGCAACTTCACGCTGCCGCTGGCGACCATG
PROTEIN sequence
Length: 338
MSTEQQGGGKGRGRHRRDRNAGPAPGVSDNEWLKVTGIDLDAQGIAHNSEGIVVFIDGALPGEEARVKVIKRKKQWEKADLVAIRRESSQRVTPRCPHFGLHAGACGGCKMQHLAPSAQVAMKQRVLENNLWHLGKVRPEMVLRPIEGPPWGYRLRARLSVRWVAKKNTVLVGFHERKSSYVADMRECHVMPKRISDMLLPLRALIEAMQARERLPQIEVAIGDQVTALVLRNLEPMSEHDMALLRSFGKAHGVQWWLQPKGPDTVVRIDDEGPELAYTLPEFGVRMPFKPTDFTQVNHQINTVLVGRALRLLDVRKDETVIDWFCGLGNFTLPLATM