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A3-16-all-fractions_k255_5987035_1

Organism: A3-16-all-fractions_metab_conc_75

partial RP 26 / 55 MC: 6 BSCG 26 / 51 MC: 7 ASCG 10 / 38 MC: 2
Location: 1..2670

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 947.0
  • Bit_score: 846
  • Evalue 2.10e-242
Ribonuclease E n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2K9_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 947.0
  • Bit_score: 846
  • Evalue 1.50e-242
ribonuclease, rne/rng family similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 947.0
  • Bit_score: 846
  • Evalue 4.30e-243

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2670
GGCGCCTCCAAGTCGGGCAAGGGCGCGTTCCTGATCTACCAGGAATCGTCGCTGGTCATCCGCGCCATCCGCGACTACTTCACGGCGGATATCGGCGAGATCCTGATCGATACGGACGACATCTTCGAGCAGGCACAGCAGTTCATGAACCACGTGATGCCCGAGACGGCCAATCGCGTGAAGCGCTACCGCGATGACGCGGCGCTGTTCAGCCGCTTCCAGATCGAGCACCAGATCGAGACCGCGTTCTCGCGCACGGTCAACCTGCCGGCCGGCGGCGCGATCGTGATCGACCACACCGAGGCACTCGTTTCCATCGACGTCAACTCCGCTCGCGCCACGCGCGGCGGCGACATCGAGGAAACCGCCACCCGCACCAATCTGGAAGCCGCCGACGAGATCGCGCGCCAGATGCGCCTGCGCGACCTCGGCGGCCTGATCGTGGTCGACTTCATCGACATGGAAGAGTCGAAGAACCGCCGCGAAGTGGAACAACGCCTGCGCGACGCGCTGCGCTTCGACCGCGCCCGCGTGCAGTTCAGCTCGATCAGCAAGTTCGGCCTGCTCGAACTCTCGCGCCAGCGCCTGCGACCCGCGCTGAGCGAGGGCAGCCACATCACCTGTCCGCGCTGCAACGGCACCGGCCACATCCGCGACACCGAGTCCTCCGCTCTGCAGATCCTGCGCATCATCCAGGAAGAGTCGATGAAGGAGAACACCGCCGCCGTGCACGTGCAGGTGCCGGTGGAAGTGGTGTCGTTCCTGCTCAACGAGAAGCGCAGCGAGATCACCAAGATCGAGCTCAAGCAGCGCACCACCGTGCTGCTGGTGCCCAACAAGCACCTGGAGACGCCCAACTACAAGCTCGAGCGCCTGCGCCACGACGACGTGCGCCTGGAAAACCTGCAGGCCAGCTACACGATGATCGAGGAGCCGCAGGACGAGGTCGCGATCACGCGTCGCGACAAGGCCAAGGCCAAGCAGGAGCCGGTCATCAAGGGCGTGCTGCCCGACCAGCCGGCGCCGCCGGCCCCGGCGCCCGTGCCGGCCCCCGTGCCGCAAGCCGTGCAGCCCACCCGGGCGCCGCGCGCCATGCCGGCACGCGCGCCGGCCAAGGCCGAAGGTGGTTTCTTCGGCTGGATCAAGAGCCTGTTCGGCGCCGCCCCGGCCCACGCGCCGGTGTCTGCTCCGGCCCCTGCGACAGCCGCTCCGGCCGCGCGCACGGGCGAAGCCCGCGATGGCTCGCGTGATGGCCGCGGCCGTGACGACAAGCGTCGCGGCGGCCGCAATGGCGAGCGTGGCGAACGCGGTGGCGAGCGTGGTGCGCGCGGTGCCGAAGGCCGTGGTGGCGAAGGCCGCGGTGGCGAACGCAAGGCCGGCGAAGGCCGCCCGCCGCGTGACGAGTCGCGCCGCAGCGAGCGCAGCGGTGAACGCGGCGAGCGCGGTGAGCGCACGGACCGCAGCCGCGAGACGGTGATGGAAAACGGCGAGGCGCGTCCGGAAGGCCGCGGCGGTCGCCGTGGCGAGCCGCGTGCCGAAGGCGCGCCGCGTGAAGGCGGACGCGAGGGTGGTCGCGAAGGCGGTCGCCGCGAGCGCGGCCCGCGCGAGGATCGTCCCGCGCAGGTCGAGGGCGCAGAAGGCATGACGGCCGAGGCCGCACCGCCGCGCGATCGCAGCGAGCGCGGCGGCCGCCGTCCGGCCCCCGCTCCGGTGGCAGAGACCTCGGAAGCGCCGACCGGCTACGGCGAATTGGGCGAGCAAGGCGAGCTGATCGACACCGCCCCCGGCGCGGAGATGATCGCCGGCGGCGTGTCCGGTGACGGCACGCCCGCGGCCGATGGCGAACGCGACGGTCGTCGCCGCCGCCGCCGTCGTGGTGGTCGCGGTCGTGACGAGGCCTCCGCCGAAGGCGGCGTCGACGGCGAGAACGCGCCGGAACGTGCTGAGGGCGAGCCCGCGGCGGAAGGTGCCGAAGGCGCCGTTGCCGCCGAAGGCGAGGCCCCGGCCGACGGCGAAGGCGGCAACCGCCGCCGTGGCCGCGGACGCGATCGCAATCGCGGCCCGCGCCGCGAAGACGGCGTCGGCGACACCGCCGGCGAAGCCGCCACCGAAGGCCTGCCCGGCAACGCCGTGCTGACCGAGGCGGCTGGCGTCGCCGAACCGGAACTGGCCCCCGCGCTCGCTGACGAGCCGGCCCCGCGCCGCGAACGCGGCGATCGTGGCGAGCACTCCGAGGTGACGGCCCCGGCCGAAGCCGCGGCGTCCGACGAGGCTCCGGCCCGCGTCGCCGTGCCGTTTGAATCGCGTGCCTTCGCGGCACCGGTGCAGGCGCCGGCGCCCGCGCCGGTGGCGGCCGCCCCTGCGGCGCCCGTCGCGCAGGTGGCGCCGGTGACGCCGGTCGTGCCGAAGTTCGACCTGCCCATCGCCGACCTGGACTCGCTCGCGGGCTCCGCCGGACTGCAATGGGTGCACTCGAACGCCGACAGCGTGCGCGCGGCCCAGGAAGCCATCGCCAACGCGCCCAAGGCCGTGCACGTGCCGCGCGAGCGTCCGCCCGCGGTCGTGATCGACGAAGGCCCGCTGGTGCTGGTCGAGACCCGCAAGGATCTCAGCCAGGTCAAGCTGCCGTTCGACGCGCCTGCACCGCAGGCGCCCGGCTTGCCGCAATAA
PROTEIN sequence
Length: 890
GASKSGKGAFLIYQESSLVIRAIRDYFTADIGEILIDTDDIFEQAQQFMNHVMPETANRVKRYRDDAALFSRFQIEHQIETAFSRTVNLPAGGAIVIDHTEALVSIDVNSARATRGGDIEETATRTNLEAADEIARQMRLRDLGGLIVVDFIDMEESKNRREVEQRLRDALRFDRARVQFSSISKFGLLELSRQRLRPALSEGSHITCPRCNGTGHIRDTESSALQILRIIQEESMKENTAAVHVQVPVEVVSFLLNEKRSEITKIELKQRTTVLLVPNKHLETPNYKLERLRHDDVRLENLQASYTMIEEPQDEVAITRRDKAKAKQEPVIKGVLPDQPAPPAPAPVPAPVPQAVQPTRAPRAMPARAPAKAEGGFFGWIKSLFGAAPAHAPVSAPAPATAAPAARTGEARDGSRDGRGRDDKRRGGRNGERGERGGERGARGAEGRGGEGRGGERKAGEGRPPRDESRRSERSGERGERGERTDRSRETVMENGEARPEGRGGRRGEPRAEGAPREGGREGGREGGRRERGPREDRPAQVEGAEGMTAEAAPPRDRSERGGRRPAPAPVAETSEAPTGYGELGEQGELIDTAPGAEMIAGGVSGDGTPAADGERDGRRRRRRRGGRGRDEASAEGGVDGENAPERAEGEPAAEGAEGAVAAEGEAPADGEGGNRRRGRGRDRNRGPRREDGVGDTAGEAATEGLPGNAVLTEAAGVAEPELAPALADEPAPRRERGDRGEHSEVTAPAEAAASDEAPARVAVPFESRAFAAPVQAPAPAPVAAAPAAPVAQVAPVTPVVPKFDLPIADLDSLAGSAGLQWVHSNADSVRAAQEAIANAPKAVHVPRERPPAVVIDEGPLVLVETRKDLSQVKLPFDAPAPQAPGLPQ*