ggKbase home page
This organism can only be binned in the context of its binning project SRVP18_trench_6_60cm. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

A3-16-all-fractions_k255_38685_4

Organism: A3-16-all-fractions_maxb_87

partial RP 36 / 55 MC: 1 BSCG 37 / 51 MC: 1 ASCG 8 / 38 MC: 2
Location: 2503..3393

Top 3 Functional Annotations

Value Algorithm Source
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60) similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 296.0
  • Bit_score: 264
  • Evalue 3.00e-68
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PHW8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 292.0
  • Bit_score: 265
  • Evalue 4.80e-68
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:CDM65852.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.2
  • Coverage: 295.0
  • Bit_score: 276
  • Evalue 2.20e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGAAGATAGGCTTTCTGGGACTAGGTCATATGGGCGCACCCATGGCTGATCGCCTGTTGGGCGCGGGGCACGAACTTCATGTATACAACCGCACGCCAACAGCTGCAGATCCTCTCGTAAAGAGGGGCGCACGTCATGCGTTGGAGCCATCGAATCTGGGCGACTGTGATATTTTAATCACGATGCTTGCTGATGACGTCGCTGTGGAAAGCGTCGTTTATGGCGAGAGAGGCTTTTTAAAGACGCTCAAGAGCGGCGCCCTCCATATCTCCATGAGCACCATCAGCCCTGCTTTAGCGGAGCGCATGGAAAAAGATCATCGGACAAAGGGATGCGCTCTGGTCGGCGCGCCTGTTTTTGGAAGGCCCGAAGCCGCGGCAGCAGGAAAGCTTTTTGTCATGGCAGGTGGAGACTCTGCGGATCTCAGCCGATGCTCATCCATCTTTGAAGCGCTCTCTCAGAAGGTCTTTCACGTGAGCCCTAAGCCATCGCTTGCGCATCTCACAAAGGTCTTAGGAAATTTCATGCTTTTGTCTTCGGTTCAAATTCTTTCGGAGTCTCTAGCGCTTGCTCACAAATCGGGACTTGATCAGGCTCAGTTTCTTGGGGCGATCACCGGATCCTTGTTCTCGGCGCCCTTGTATAAAAACTATGGTGGAATGATCATCGATCAGCTCTATGACAAGAAAGTGGCCTTTCGCTTGCCGTTGGCGCTCAAGGATATCCGTCTTGCCAAGCAGGCCGCAGACTCCGTGGGCAGTCCTTTACCTTCAGCAAGCTTGGTTCATGATCAAATCATCACAGCGATTGCTCGCGGCATGAAAGACATGGATCTCAGCGCGCTTGGAAAGCTTGCTTCGGATAATGCTGGCCTCGGATCTGCCAGTTGA
PROTEIN sequence
Length: 297
MKIGFLGLGHMGAPMADRLLGAGHELHVYNRTPTAADPLVKRGARHALEPSNLGDCDILITMLADDVAVESVVYGERGFLKTLKSGALHISMSTISPALAERMEKDHRTKGCALVGAPVFGRPEAAAAGKLFVMAGGDSADLSRCSSIFEALSQKVFHVSPKPSLAHLTKVLGNFMLLSSVQILSESLALAHKSGLDQAQFLGAITGSLFSAPLYKNYGGMIIDQLYDKKVAFRLPLALKDIRLAKQAADSVGSPLPSASLVHDQIITAIARGMKDMDLSALGKLASDNAGLGSAS*