ggKbase home page

A3-18-all-fractions_k255_2135480_16

Organism: A3-18-all-fractions_metab_conc_132

partial RP 24 / 55 MC: 2 BSCG 22 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(11454..12041)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Microbacterium sp. TS-1 RepID=U2YLT3_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 179.0
  • Bit_score: 162
  • Evalue 2.90e-37
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.9
  • Coverage: 179.0
  • Bit_score: 164
  • Evalue 1.40e-37
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 183.0
  • Bit_score: 149
  • Evalue 5.50e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Propionibacterium freudenreichii → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 588
GTGGAGCCCCACGGGAACGCGGTGCAGACCCTGGGGAACCGGGTGCCCGCCGGCCTCGCTGCCGCCTCGGACGAGTTCCTGGCCGCTCGTGCCGCCGACGGCGACCTCGCGTCGTTCACCGCGCTGCTCCGCCGCATGAGCCCGGCGTTGCGGGCGTACATCAACCGGATCACCCGCCGTCCCCAGGAGACCGACGACGTCCTGCAGGAGGTCGCCCTGATCGTCTGGCAGCAGCTGCCGAGCCTCCGCGAGAGCGCGTCGGTGCGCCCGTGGATGCTGCGGATCGCGAGCCGCGCGGCGTTCGCACAGCTCCGCCGGATCCCCGATCACGACCTCGCGGACGAGGAGCGGCCGGCGGAGGATCCCTCGCCCGAGGAACGGGCCGAGTGGCGGGACCGGTGGGCGGCGCTCTCCGCGGTGCTGTCGCACCTCCCGCAGCAGCAGGCACGATGCTGGGTGCTCCGGGAGATCGGCGGCTACACCTACGACGAGATCGCCGAGCAGCTCGGGGTCCCCGCGTCCACCGTGCGCGGGGCGCTCTCCCAGGCCAGGAAGCGCATCCTCCAGCAGATGGGAGGGTGGCAGTGA
PROTEIN sequence
Length: 196
VEPHGNAVQTLGNRVPAGLAAASDEFLAARAADGDLASFTALLRRMSPALRAYINRITRRPQETDDVLQEVALIVWQQLPSLRESASVRPWMLRIASRAAFAQLRRIPDHDLADEERPAEDPSPEERAEWRDRWAALSAVLSHLPQQQARCWVLREIGGYTYDEIAEQLGVPASTVRGALSQARKRILQQMGGWQ*