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A3-18-all-fractions_k255_2135480_25

Organism: A3-18-all-fractions_metab_conc_132

partial RP 24 / 55 MC: 2 BSCG 22 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 16208..17065

Top 3 Functional Annotations

Value Algorithm Source
Conserved membrane protein, putative pilus assembly protein n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5B883_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 286.0
  • Bit_score: 298
  • Evalue 3.80e-78
Type II secretion system protein F {ECO:0000313|EMBL:KDP90496.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 286.0
  • Bit_score: 302
  • Evalue 4.80e-79
conserved membrane protein, putative pilus assembly protein similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 286.0
  • Bit_score: 298
  • Evalue 1.10e-78

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 858
GTGATCCCGGCCCTCGGGGCGCTCGGCGGAACGGGGCTGCTGCTCGTCGTCTCGCCCCTGCTCTGGCCGGCGGGACCCGCTCGCCGACCCCGCGGGGACCAGGGCCGGGCCGCCGATCGGCTCGCCCGGGCCGGCGTGCGGGGCGTCGCGCCCGGACTGTTCCTCCCGGTGTCCGTGCTCGTCGGTCTCGCCGCCGGTGCGCTCGTGCAGGCCGCGACGGGTGTCCCCGCGGCGGCGGCGGTCGCATCCGTCGCGACCGCCGCCACCCCGTGGAGCGTCCTGGGCGCGCGGGCCAGGGCCCGGACGCGGGCGTCGCGGGGCCTCTGGCCGGAGGTGGTCGACCACCTCGTCGCCTCGGTGCGGGCGGGCCTGCCGCTCCCCGACGCGGTCGCCGTGCTGGCGACCGAGGGCCCGGTGCCGCTCCGAGGCGGCTTCGTCCTGTTCGAGCGGCGCTGGCGCGACACCGGCACCGTGTCGGCGGGCCTCGACGCCGCGAAGGAGCACTTCGCCGATCCGACCGCGGACCGCCTGATCGAGATCCTCCGGATGGCGCGGCAGGTCGGCGGGACGGAGCTGCCGTCGGTGCTGCGTGACCTCGCCGCCCACCTCCGGCAGGACCTGGCGCTGCGCTCGGAGGCCGAGGCGCGGCAGTCGTGGGTGACCGGTGCCGGCAAGCTCGGGCTCGCGGCGCCCTGGATCGTGCTCGGCCTCCTCGCGACCAGGCCGGAGGCCGCGGCCGCGTACGCGAGCCCCGGGGGCGGCGTGCTCATCGCGGTCGCCGCAGTGGTCACGCTGGCCGCGTACCGGGCGATGGTGGCGATCGGGCGGCTCCCCGAGGACCGGCGGTGGTTCCGGTGA
PROTEIN sequence
Length: 286
VIPALGALGGTGLLLVVSPLLWPAGPARRPRGDQGRAADRLARAGVRGVAPGLFLPVSVLVGLAAGALVQAATGVPAAAAVASVATAATPWSVLGARARARTRASRGLWPEVVDHLVASVRAGLPLPDAVAVLATEGPVPLRGGFVLFERRWRDTGTVSAGLDAAKEHFADPTADRLIEILRMARQVGGTELPSVLRDLAAHLRQDLALRSEAEARQSWVTGAGKLGLAAPWIVLGLLATRPEAAAAYASPGGGVLIAVAAVVTLAAYRAMVAIGRLPEDRRWFR*