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A3-18-all-fractions_k255_3028719_20

Organism: A3-18-all-fractions_metab_conc_132

partial RP 24 / 55 MC: 2 BSCG 22 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 20692..21348

Top 3 Functional Annotations

Value Algorithm Source
rnhA; ribonuclease H (EC:3.1.26.4) similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 249.0
  • Bit_score: 287
  • Evalue 2.50e-75
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 249.0
  • Bit_score: 287
  • Evalue 1.20e-74
ribonuclease HI n=1 Tax=Agromyces italicus RepID=UPI0003B4B353 similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 233.0
  • Bit_score: 288
  • Evalue 5.10e-75

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 657
GTGACGATCACCGCTGCCGCCGACGGGTCGGCCCTCGGCAACCCGGGTCCGGCCGGCTGGGCCTGGTACATCGACGACGACCACTGGGCCGCCGGCGGGTGGAAGCACGGCACGAACAACATGGGCGAGCTGAAGGCCGTGCTCGAGCTCTTCCGTGCCACGAGCGGCGTCGACGACGACCTGCTCGTGCTCTGCGACAGCCAGTACGTCATCAACTCGGTCACGAAGTGGATGCCCGGCTGGAAGCGGAAGGGCTGGCGCAAGGCGGACGGCAAGCCGGTCCTGAACGTCGACCTGCTCCAGGAGCTCGACCGGGCGATCGCCGGGCGCCGCTACCGCTTCGAGTGGGTGAAGGGCCACGTCGGCCACGAGCTGAACGAAGCGGCGGACGAGCGCGCCAGGGCCGTCGCCACGGCCTACCAGCAGGGCACCCCGATCCCGACCGGGCCCGGTTTCGGCAGCCCGCCCGCTCCCCCGGCGGTGACGGGAGCGACGGATCCGCTGGCTCTCTTCGACGTGGACGCCGCACCGGTGCGGCCGCACCGTGTCACGGTCGATCTCGCCACCGACGAGTGGCGCCGCCTCGAGCGACGCGCGGCCGCCGCGGGGATGAAGCCGGAGGACCTCCTCCGGTCGTTCGCGACCGGCACGGACTGA
PROTEIN sequence
Length: 219
VTITAAADGSALGNPGPAGWAWYIDDDHWAAGGWKHGTNNMGELKAVLELFRATSGVDDDLLVLCDSQYVINSVTKWMPGWKRKGWRKADGKPVLNVDLLQELDRAIAGRRYRFEWVKGHVGHELNEAADERARAVATAYQQGTPIPTGPGFGSPPAPPAVTGATDPLALFDVDAAPVRPHRVTVDLATDEWRRLERRAAAAGMKPEDLLRSFATGTD*