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A3-18-all-fractions_k255_4389931_4

Organism: A3-18-all-fractions_metab_conc_132

partial RP 24 / 55 MC: 2 BSCG 22 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(2597..3124)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-70 n=1 Tax=Salinispora arenicola RepID=UPI00035F9123 similarity UNIREF
DB: UNIREF100
  • Identity: 41.6
  • Coverage: 161.0
  • Bit_score: 116
  • Evalue 2.10e-23
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:KHD78120.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 155.0
  • Bit_score: 120
  • Evalue 1.60e-24
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 155.0
  • Bit_score: 114
  • Evalue 3.00e-23

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Taxonomy

Actinoplanes utahensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGAGCGCGATCGCCCCGAGCCTGACGGAGGTGCACCGGATGGCCGAATGGCCTGCGGACCCGGCCTTCGCGCGGTTCGCGCGCGAGCAGGGACCGCGGCTCGTCCGGCTCGCGACGCTGCTCACCGGCAACGCCGCCGACGGTGAGGACGCGGCGCAGGACGCCTTCGTCGCGCTCGCGGGCGCCTGGTCGCGTGTGCGTCAGGACACCGCGGTCGCGTACGCCCGGAGGATCGTGGCGCGGAAGGCGCTCGACGTCATCGGGCGACGGCGCGACCGTCCCGTCGAGGCCGTGCCGGACGAGGCGCGCGACGATCCCGCCCTGCTCAAGTACGAGGAGGACCGGGCCTTCGTCGAGCACGTGCGCCTGCTCCCCGCCCGGCAGCGGGCGGTGCTCGTGCTCCGGTACGCGGCGGACCTCGACGACCGCGAGATCGCTCGGCTCCTCGGCTGTCGCCAGAGCACCGTGCGCAGCCAGGCCGCACGCGGGCTCGCGACGCTCCGGGACGCGATGGGGGAGGACCGATGA
PROTEIN sequence
Length: 176
MSAIAPSLTEVHRMAEWPADPAFARFAREQGPRLVRLATLLTGNAADGEDAAQDAFVALAGAWSRVRQDTAVAYARRIVARKALDVIGRRRDRPVEAVPDEARDDPALLKYEEDRAFVEHVRLLPARQRAVLVLRYAADLDDREIARLLGCRQSTVRSQAARGLATLRDAMGEDR*