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A3-18-all-fractions_k255_5641685_4

Organism: A3-18-all-fractions_metab_conc_132

partial RP 24 / 55 MC: 2 BSCG 22 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 2235..3443

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B34195 similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 416.0
  • Bit_score: 381
  • Evalue 6.20e-103
putative ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 409.0
  • Bit_score: 317
  • Evalue 4.10e-84
Putative RNA polymerase, sigma-24 subunit, ECF subfamily protein {ECO:0000313|EMBL:AEB43599.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.9
  • Coverage: 409.0
  • Bit_score: 317
  • Evalue 2.00e-83

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Taxonomy

Verrucosispora maris → Verrucosispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1209
GTGGCCACTTCCGCCCTGGACGAGACGTTCCGGCGGGAGTGGCCGCGCATCGTCGCGGCGGTCGCGCGCTACACCGGCGACCTCGACCTCGCCGAGGACGCCGTGCAGGAGGCGTTCGCGCGCGCTGCAGCGAGCCGTGACCGCGAGGTGCTCATCAACGCGGGGGCATGGCTCACCACGGTGGCGAAGCGGATCGCGATCGACACGGTGCGGCGCGAGGCGCGGCTCGCGGAGCGGTTGCCCCTGCTCGCGGAGGACGCGCCGCAGACGGTGGGCGGACCGGCCGGCGACGACCGGCTCGCGCTGCTGTTCGCGGTCTGCACGCCGGCGCTCGAGCCGGAGACGCGGCTGGCCCTCGCCCTCCGCTTCGTGTGCGGCGTGCCGACGGCGGAGATCGCGGCGGCGATGCTCGTCGGGCATCCGGCGATGAGCGCCCGTCTCACCCGCGCGAAGCGGCGGATCGCCCAGGACGGCGTGCGGTTCGTGGTGCCGGAGGGGGACGCCCTCGCCGAGCGGCTGCCCGACGTGCTCGTCACCGTGCATCTGCTCTACACGATCGGCCACACGGCGTCCGCGGGGACGGCGCTCCGGTCCGCCCCGGTGACCGGCACGGCGCTCGAGCTCGCCCGCGCGCTCCGGCGGCTGGCGCCGGACGACCTGGACGTCGCCGGACTGACCGCGCTCCTGCTGCTCAGCGAGGCGCGGGCGCCCGGCCGGGTGCGCGACGACGGGGCCCTCGCCACCCTCGAGGACGCGGACCGCGGTGCGTGGGACCGGGCGCTGCTCGAGGAGGGGCTCGGCCTCGCCGCCGCCTCGCTCGCGGGCGGCGGTCGCTTCGCCCTCGAAGCCGGCATCTCGGGTCTCCACTCGCAGGCGCCGGACTTCGCCGCGACCGACTGGGCGGCGATCGGCCGGCTCTACGACCGGCTGATCGAGCGCTGGCCCTCGCCCTCGGCGCACGTCGCGCGCCTCGTCGCGCGCAGCTTCCTGCCGGGGGAGGCGGCCGCGTCGCTGGCCGCGCTCACCGAGCTCGGGGCGTCGACGCCCGCGGTCGCCAGGCAGGTCGCCGCGGCGCGCGCCGACGTGCTGCGGCGCATGCAGCGGGTCCAGGAGGCGCGCGCGGCGTACGCGGCGGCGCGCTCGATCGAGCAGAACGCGGCGGTCAGGGACTTCTACGGTGCCCGGATCGCGGAGCTGGAGCAGCGGTGA
PROTEIN sequence
Length: 403
VATSALDETFRREWPRIVAAVARYTGDLDLAEDAVQEAFARAAASRDREVLINAGAWLTTVAKRIAIDTVRREARLAERLPLLAEDAPQTVGGPAGDDRLALLFAVCTPALEPETRLALALRFVCGVPTAEIAAAMLVGHPAMSARLTRAKRRIAQDGVRFVVPEGDALAERLPDVLVTVHLLYTIGHTASAGTALRSAPVTGTALELARALRRLAPDDLDVAGLTALLLLSEARAPGRVRDDGALATLEDADRGAWDRALLEEGLGLAAASLAGGGRFALEAGISGLHSQAPDFAATDWAAIGRLYDRLIERWPSPSAHVARLVARSFLPGEAAASLAALTELGASTPAVARQVAAARADVLRRMQRVQEARAAYAAARSIEQNAAVRDFYGARIAELEQR*