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A3-18-all-fractions_k255_7185692_7

Organism: A3-18-all-fractions_metab_conc_132

partial RP 24 / 55 MC: 2 BSCG 22 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(4696..7140)

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 825.0
  • Bit_score: 1394
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:CCE76520.1};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 825.0
  • Bit_score: 1394
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=RPOC_CLAMS similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 825.0
  • Bit_score: 1394
  • Evalue 0.0

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2445
ATGGTGGAGCGTTCGCGCCCGCAGGTGTGGGACGTGCTCGAGGAGATCATCCGCGAGCGCCCCGTGCTGCTGAACCGTGCGCCCACGCTGCACCGTCTCGGCATCCAGGCGTTCGAGCCGCAGCTCGTCGAGGGCAAGGCGATCCAGCTGCACCCGCTCGTCTGCTCGGCGTTCAACGCCGACTTCGACGGTGACCAGATGGCCGTGCACCTGCCGCTGTCCGTCGAGGCCCAGGCCGAGGCGCGCATCCTGATGCTCGCGTCGAACAACATCCTGAAGCCGTCCGACGGCCGCCCGGTGACCCTGCCCAGCCAGGACATGATCATCGGCCTGCACCACCTGACCACGGTCAAGCCGGGTGCCATCGGCGAGGGCCGCGTGTTCTCGTCGGTGTCCGAGGCGATCATGGCGAAGGACGCGGGCACGCTCGACCTGAACGCGAAGGTGACGATCCGCCTCAGCGGCATCGTGCCGCCGGAGGGCCGCGTGCCCGAGGGTGCCTCGGTGGCGCCGAACGGCATCGTCGAGCAGCCGATCCTGCTCGAGACGACGCTGGGCCGGGCCCTGTTCAACGAGACGCTGCCGGAGGACTACCCCTTCGTCGACGCGCTCGCCGACAAGGGCGCGATCTCCGCGATCGTCAACGACCTCGCGGAGCGCTACCCGAAGGTGGAGGTCGCGGCGACGCTCGACCGGATCAAGGACGCCGGCTTCTACTGGGCCACCCGGTCCGGTGTGACGGTCGCCCTGTCCGACGTGCTCACCCCGCCGACCAAGGCTGCGATCCTCGAGGGCTACGAGAAGCAGGCCGCGAAGGTCCAGAGCCAGTACGAGACCGGTCTCACCACCGACGCCGAGCGGCGCCAGGAGCTCATCGAGATCTGGAACCGCGCGACGGCCGAGGTCGCCAGGGCGATGGAGGACAACCTCCCCGCCGGCAACAACATCAACCGCATGGTGTCGTCCGGTGCCCGTGGTAACTGGATGCAGGTGCGGCAGATCGCCGGTATGCGCGGCCTCGTGTCGAACCCGAAGGGCGAGATCATCCCGCGTCCGATCGTGCACTCGTACCGCGAGGGCCTGACGGTGGCGGAGTACTTCATCTCGACCCACGGTGCCCGCAAGGGCCTCGCGGACACGGCCCTCCGCACGGCGGACTCCGGGTACCTCACCCGTCGTCTCGTCGACGTGAGCCAGGACGTGATCATCCGTGAGGACGACTGCGGCACCTCGCGCGGTCTCGACCTCTCCACCAGCGAGAACATCGAGAACTCCGTGTACGGCCGCACGCTCGCGACGGACGTCGTGAACGCCGCCGGCGAGGTGCTCGCCGAGGCGGGTGCCGATGTCGGTGACGTGCTCATCGCGAAGCTCGTCGAGGAGGGGATCGAGCACATCAAGGTGCGCTCGGTGCTCACCTGCGAGTCCGCGGTCGGCGTCTGCGCCGCCTGCTACGGCCGCTCGCTGGCCACCGGCAAGCTCGTGGACATCGGTGAGGCCGTCGGCATCATCGCGGCCCAGTCGATCGGTGAGCCGGGCACCCAGCTCACGATGCGCACCTTCCACACCGGTGGTGTGGCGTCGGCCGACGACATCACGCAGGGTCTGCCCCGCGTGCAGGAGCTGTTCGAGGCCCGCACCCCGAAGAGCGCGTCGCCGATCGCGGAGGCCGCCGGTGTCATCACCATCGAGGACTCGGACCGTCAGCGGAAGCTGATCCTGACCCCCGACAACGGTGACGAGCCGCACGCCTACCCGGTGCTCAAGCGGGCCACACTCCTCATCGAGGACGGCCAGCACGTCGAGCTCGGCCAGCAGCTGCACGTCGGCTCCGTGGACCCGAAGGAGGTGCTGCGCGTCAAGGGCGTCCGCGCCGTGCAGCAGCACCTCGTCGACGGCGTCCAGGGCGTCTACCGCAGCCAGGGCGTACCGATCCACGACAAGCACATCGAGGTCATCGTGCGGCAGATGCTGCGCAAGGTGACCGTGGTGGACCACGGCGACACCGACCTGCTGCCGGGCGAGCTCGTGGACCGGTCCCGCTACCAGGAGGTCAACCGCGCCGCGCTCGCGGAGGGCAAGAAGACGGCGTCGGCCCGTCAGGAGGTCATGGGTATCACCAAGGCCTCGCTGGCGACCGAGTCGTGGCTCTCCGCCGCCTCCTTCCAGGAGACGACGCGGGTGCTGACGCAGGCGGCGATGGACGGCAAGTCCGACCCGCTGCTCGGCCTCAAGGAGAACGTGATCATCGGCAAGCTGATCCCGGCCGGCACCGGCCTTCCCCGGTACCGCGACGTGAAGGTGGAGCCCACGGAGGAGGCGAAGGCCGAGCGGTACCCGCTCCGGTCCTTCGGCGACGAGTCGGTGTTCAACGACGCCGACCTGTCGTTCGTCGACTTCGACTCGTTCTCGAGCGACGACTACACCCCCGGCACCTACAACTGA
PROTEIN sequence
Length: 815
MVERSRPQVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCSAFNADFDGDQMAVHLPLSVEAQAEARILMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTVKPGAIGEGRVFSSVSEAIMAKDAGTLDLNAKVTIRLSGIVPPEGRVPEGASVAPNGIVEQPILLETTLGRALFNETLPEDYPFVDALADKGAISAIVNDLAERYPKVEVAATLDRIKDAGFYWATRSGVTVALSDVLTPPTKAAILEGYEKQAAKVQSQYETGLTTDAERRQELIEIWNRATAEVARAMEDNLPAGNNINRMVSSGARGNWMQVRQIAGMRGLVSNPKGEIIPRPIVHSYREGLTVAEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTSRGLDLSTSENIENSVYGRTLATDVVNAAGEVLAEAGADVGDVLIAKLVEEGIEHIKVRSVLTCESAVGVCAACYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRVQELFEARTPKSASPIAEAAGVITIEDSDRQRKLILTPDNGDEPHAYPVLKRATLLIEDGQHVELGQQLHVGSVDPKEVLRVKGVRAVQQHLVDGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTVVDHGDTDLLPGELVDRSRYQEVNRAALAEGKKTASARQEVMGITKASLATESWLSAASFQETTRVLTQAAMDGKSDPLLGLKENVIIGKLIPAGTGLPRYRDVKVEPTEEAKAERYPLRSFGDESVFNDADLSFVDFDSFSSDDYTPGTYN*